RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 DNAJB8Q8NHS0 232 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 GPR151Q8TDV0 419 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 ADAMTS15Q8TE58 950 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 HOXB13Q92826 284 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-235ENST00000495515 OMA1Q96E52 524 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 GIMAP5Q96F15 307 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 SLC35G5Q96KT7 338 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 SLC35A5Q9BS91 424 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 INPP5KQ9BT40 448 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 GIN1Q9NXP7 522 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 LEF1Q9UJU2 399 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-235ENST00000495515 NDUFAF1Q9Y375 327 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 LOC400499M0QZD8 3231 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 DUXAA6NLW8 204 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 SHOX2O60902 331 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NME6O75414 186 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 REM1O75628 298 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 PPM1BO75688 479 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NKX2-2O95096 273 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 KCNH1O95259 989 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 FAM107AO95990 144 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 SP1P08047 785 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 ZCCHC18P0CG32 403 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 IL12BP29460 328 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 GABRA3P34903 492 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 TXNL4AP83876 142 aaKnown RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 KLF10Q13118 480 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 UBAP2LQ14157 1087 aaKnown RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NTRK2Q16620 822 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 ZNF791Q3KP31 576 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NADK2Q4G0N4 442 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 GKAP1Q5VSY0 366 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 CDC73Q6P1J9 531 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 LYPD8Q6UX82 237 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NPSR1Q6W5P4 371 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 GK5Q6ZS86 529 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NUP54Q7Z3B4 507 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 PIGWQ7Z7B1 504 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 FAM98AQ8NCA5 519 aaKnown RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 FAM13CQ8NE31 585 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 GTF2H4Q92759 462 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 TMBIM1Q969X1 311 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NEURL3Q96EH8 262 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 SIGLEC12Q96PQ1 595 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 CCT8L2Q96SF2 557 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 STACQ99469 402 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 TRIM4Q9C037 500 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 NMUR2Q9GZQ4 415 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 PIGUQ9H490 435 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 SERHLQ9NQF3 203 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 DUSP22Q9NRW4 184 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 GPATCH2Q9NW75 528 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 CBLCQ9ULV8 474 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 ARL2BPQ9Y2Y0 163 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 KLF13Q9Y2Y9 288 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-235ENST00000495515 CSAG2Q9Y5P2 127 aa15.77■□□□□ 0.12
HDAC6-235ENST00000495515 PIEZO2Q9H5I5 2752 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 A0A096LPI6 279 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 ZNF354AO60765 605 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 AGR2O95994 175 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 P04436 131 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 GSNP06396 782 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 CAPN3P20807 821 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 MATN1P21941 496 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 MAP3K8P41279 467 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 MAGEA8P43361 318 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 ST13P50502 369 aaKnown RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 GAB1Q13480 694 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 EFR3AQ14156 821 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 INAQ16352 499 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 PLEKHN1Q494U1 663 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 SLC22A10Q63ZE4 541 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 SAXO2Q658L1 398 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 RPUSD3Q6P087 351 aaKnown RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 SLC2A7Q6PXP3 512 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 ANGPTL8Q6UXH0 198 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 DNAJC14Q6Y2X3 702 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 WDR53Q7Z5U6 358 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 PRR22Q8IZ63 422 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 COX18Q8N8Q8 333 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 SLC16A11Q8NCK7 471 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 PSD4Q8NDX1 1056 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 SCMH1Q96GD3 660 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 C16orf58Q96GQ5 468 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 PHF12Q96QT6 1004 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 SECISBP2Q96T21 854 aaKnown RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 YIPF4Q9BSR8 244 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 SACM1LQ9NTJ5 587 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 CNIH4Q9P003 139 aa15.76■□□□□ 0.11
HDAC6-235ENST00000495515 FASNP49327 2511 aaKnown RBP15.76■□□□□ 0.11
HDAC6-235ENST00000495515 OR6C70A6NIJ9 312 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 KLRC4-KLRK1H3BQV0 150 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 HS6ST1O60243 411 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 NME2P1O60361 137 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 ACP2P11117 423 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 NME2P22392 152 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 PIGAP37287 484 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 CDKN2CP42773 168 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 PNLIPRP2P54317 469 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 STX5Q13190 355 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms