RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 HOXB13Q92826 284 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-225ENST00000494465 AHCYL2Q96HN2 611 aaKnown RBP15.42■□□□□ 0.06
ATG4B-225ENST00000494465 A0A1W2PRQ8 180 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 TPST2O60704 377 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 ABCB7O75027 752 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 WBP4O75554 376 aaKnown RBP15.42■□□□□ 0.06
ATG4B-225ENST00000494465 PRKAR1BP31321 381 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 FMO3P31513 532 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 GGT2P36268 569 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 GPR3P46089 330 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 SKP1P63208 163 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 IGLV3-21P80748 117 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-225ENST00000494465 DGCR6Q14129 220 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 DCST1Q5T197 706 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 BROXQ5VW32 411 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 XAF1Q6GPH4 301 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 DHRS4L2Q6PKH6 230 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 KANSL1Q7Z3B3 1105 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 ENTHD1Q8IYW4 607 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 CDRT4Q8N9R6 151 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 BPIFB6Q8NFQ5 453 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 OR6C4Q8NGE1 309 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 APH1BQ8WW43 257 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 POLR1BQ9H9Y6 1135 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 CXorf21Q9HAI6 301 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 ENAMQ9NRM1 1142 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 DUSP22Q9NRW4 184 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 SEMA5BQ9P283 1151 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 ADAMTS20P59510 1910 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 FAAHO00519 579 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 CTNSO60931 367 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 CDC123O75794 336 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-225ENST00000494465 CD1CP29017 333 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 GSTT1P30711 240 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 NUP107P57740 925 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 CXCR4P61073 352 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 PIGFQ07326 219 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 MAP4K2Q12851 820 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 ERV3-1Q14264 604 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 AMZ1Q400G9 498 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 CCNJQ5T5M9 372 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 ZCCHC12Q6PEW1 402 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 ZNF595Q8IYB9 648 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 CLIP4Q8N3C7 705 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 METTL27Q8N6F8 245 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-225ENST00000494465 OR52P1PQ8NH57 321 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 PRRC1Q96M27 445 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 STACQ99469 402 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 ZNF350Q9GZX5 532 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 MTHFD2LQ9H903 347 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-225ENST00000494465 ZNF556Q9HAH1 456 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 BLOC1S6Q9UL45 172 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 WDR45Q9Y484 360 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 SH3PXD2BA1X283 911 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 OR2W5A6NFC9 320 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 FRS3O43559 492 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 UGT2B17O75795 530 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 OXSR1O95747 527 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-225ENST00000494465 MAPK10P53779 464 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 BTG2P78543 158 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 HPCAP84074 193 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 SLC13A2Q13183 592 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 SMN1Q16637 294 aaKnown RBP15.41■□□□□ 0.06
ATG4B-225ENST00000494465 ZBED5Q49AG3 693 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 SPARTQ8N0X7 666 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 CARFQ8N187 725 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 VWA5B2Q8N398 1253 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 Q8N9G6 341 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-225ENST00000494465 PIK3R3Q92569 461 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 MMABQ96EY8 250 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-225ENST00000494465 TSC22D3Q99576 134 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 PRR14Q9BWN1 585 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 IRAK4Q9NWZ3 460 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 PILRBQ9UKJ0 227 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 TMCC3Q9ULS5 477 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 SATB2Q9UPW6 733 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 RNF6Q9Y252 685 aa15.41■□□□□ 0.06
ATG4B-225ENST00000494465 MN1Q10571 1320 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-225ENST00000494465 CENPVL1A0A0U1RR11 272 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 DUX1O43812 170 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 OR10H2O60403 315 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 ADAP00813 363 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 ALOX5P09917 674 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 JUNBP17275 347 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-225ENST00000494465 ARRB1P49407 418 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-225ENST00000494465 SEPHS1P49903 392 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 EMP3P54852 163 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 SMIM11AP58511 58 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 HSD11B2P80365 405 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 PROX2Q3B8N5 592 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 GPR141Q7Z602 305 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 PLXDC1Q8IUK5 500 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 MAML2Q8IZL2 1156 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-225ENST00000494465 NMD3Q96D46 503 aaKnown RBP15.4■□□□□ 0.06
ATG4B-225ENST00000494465 SAP130Q9H0E3 1048 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 RASSF1Q9NS23 344 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 FBXO34Q9NWN3 711 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 REV1Q9UBZ9 1251 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 FTSJ1Q9UET6 329 aa15.4■□□□□ 0.06
ATG4B-225ENST00000494465 ZNF443Q9Y2A4 671 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms