RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ZNF721Q8TF20 911 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 TANKQ92844 425 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 SENP5Q96HI0 755 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 MAGED4Q96JG8 741 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 DGAT2Q96PD7 388 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 RASL10BQ96S79 203 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 MRPL57Q9BQC6 102 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 NTMT1Q9BV86 223 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 ZNF717Q9BY31 904 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 DDX31Q9H8H2 851 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 ZBTB26Q9HCK0 441 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 SEMA4BQ9NPR2 832 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 HPF1Q9NWY4 346 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 PSD3Q9NYI0 1048 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 COPS7AQ9UBW8 275 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 PHF11Q9UIL8 331 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 TINAGQ9UJW2 476 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 TMCO1Q9UM00 188 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 ZNF835Q9Y2P0 537 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 HIVEP3Q5T1R4 2406 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 A0A0A6YYD5 115 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 GLOD5A6NK44 160 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 PRSS44E7EML9 344 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 PPP6CO00743 305 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 TFECO14948 347 aaPredicted RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 TMPRSS11DO60235 418 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 HS6ST1O60243 411 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 PDE9AO76083 593 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 GPR75O95800 540 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 JUNP05412 331 aaKnown RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 SBK3P0C264 359 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 RHOXF2BP0C7M4 288 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 OSMP13725 252 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 ALOX15P16050 662 aaPredicted RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 ABOP16442 354 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 TSPAN8P19075 237 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 SOX3P41225 446 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 STT3AP46977 705 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 MTNR1BP49286 362 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 CDH13P55290 713 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 IGLV3-21P80748 117 aaPredicted RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 TNFRSF17Q02223 184 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 PLP2Q04941 152 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 ASPHQ12797 758 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 DUSP8Q13202 625 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 SLC29A2Q14542 456 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 GAGE13Q4V321 117 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 SGO1Q5FBB7 561 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 FRG2Q64ET8 278 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 MTFR2Q6P444 385 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 Q6ZPB1 254 aaPredicted RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 DGAT2L6Q6ZPD8 337 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 TRMT10CQ7L0Y3 403 aaKnown RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 NUDT13Q86X67 352 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 GPALPP1Q8IXQ4 340 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 POGLUT1Q8NBL1 392 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 PSD4Q8NDX1 1056 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 OR4F6Q8NGB9 312 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 OR8K3Q8NH51 312 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 DOK4Q8TEW6 326 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 ITLN2Q8WWU7 325 aaPredicted RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 UCN3Q969E3 161 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 TRIM44Q96DX7 344 aaPredicted RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 FRG2BQ96QU4 278 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 SERPINI1Q99574 410 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 RHOXF2Q9BQY4 288 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 MRPL46Q9H2W6 279 aaKnown RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 WDR41Q9HAD4 459 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 DEPPQ9NTK1 212 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 LYARQ9NX58 379 aaKnown RBP7.46□□□□□ -1.22
RIF1-211ENST00000494333 ING3Q9NXR8 418 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 TMEM216Q9P0N5 145 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 PCTPQ9UKL6 214 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 ASB4Q9Y574 426 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 SVILO95425 2214 aa7.46□□□□□ -1.22
RIF1-211ENST00000494333 CPAMD8Q8IZJ3 1885 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 IQANK1A0A1B0GTG1 560 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 A0A1B0GTH9 108 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 A8MT66 165 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 G3V3Y1 287 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 PRRG2O14669 202 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 PGRMC2O15173 223 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 RIPK2O43353 540 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 OR10H2O60403 315 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 CDC40O60508 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
RIF1-211ENST00000494333 ZNF354AO60765 605 aaPredicted RBP7.45□□□□□ -1.22
RIF1-211ENST00000494333 TMEM127O75204 238 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 SUPT7LO94864 414 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 OTCP00480 354 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 IGKV3-11P04433 115 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 KLK1P06870 262 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 ABHD2P08910 425 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 TAC1P20366 129 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 CNR1P21554 472 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 GCAP28676 217 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 PTGER1P34995 402 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 PTGS2P35354 604 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 PLIN5Q00G26 463 aa7.45□□□□□ -1.22
RIF1-211ENST00000494333 PLGLB1Q02325 96 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms