RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PKDREJQ9NTG1 2253 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IGLV3-12A0A075B6K2 115 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 IGHV3-20A0A0C4DH32 117 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 LINC00854A0A1B0GVQ3 168 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 WIPF3A6NGB9 483 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 AGAP5A6NIR3 686 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 E5RI56 91 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 H7BY64 318 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 GFYI3L273 518 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 KPNA5O15131 536 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 LCMT2O60294 686 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 SRPX2O60687 465 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 POLQO75417 2590 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF254O75437 659 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 KCNK2O95069 426 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 KCNH1O95259 989 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 B3GALT4O96024 378 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 C1QAP02745 245 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 MPC1LP0DKB6 136 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ERVK-10P10266 1014 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 FBLP22087 321 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CMPK1P30085 196 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 SOX11P35716 441 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 HTR2BP41595 481 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 GLRBP48167 497 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 NKX2-5P52952 324 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CDKN2DP55273 166 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 PRDX1Q06830 199 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 AIMP2Q13155 320 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 PCOLCEQ15113 449 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 MAPK11Q15759 364 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CTF1Q16619 201 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 C4orf17Q53FE4 359 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CYBRD1Q53TN4 286 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CLVS2Q5SYC1 327 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 YOD1Q5VVQ6 348 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CES4AQ5XG92 561 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 B3GNTL1Q67FW5 361 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 DESI1Q6ICB0 168 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CCBE1Q6UXH8 406 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 SLC16A12Q6ZSM3 486 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ZCCHC23Q6ZST2 131 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 LANCL3Q6ZV70 420 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 SPATC1Q76KD6 591 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 VN1R5Q7Z5H4 357 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 P2RY8Q86VZ1 359 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 KCNMB4Q86W47 210 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 C10orf107Q8IVU9 208 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 DDIASQ8IXT1 998 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ZADH2Q8N4Q0 377 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 SIRT6Q8N6T7 355 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CSNK1A1LQ8N752 337 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 PSD4Q8NDX1 1056 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF555Q8NEP9 628 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 TRPV3Q8NET8 790 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 MCFD2Q8NI22 146 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 DYNC2LI1Q8TCX1 351 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 MCOLN3Q8TDD5 553 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 BRIX1Q8TDN6 353 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 EEF1AKMT1Q8WVE0 214 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 RORBQ92753 470 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF566Q969W8 418 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ISL2Q96A47 359 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 SLCO4A1Q96BD0 722 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 NXNL1Q96CM4 212 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 FOPNLQ96NB1 174 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 PRAP1Q96NZ9 151 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 WDR77Q9BQA1 342 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF395Q9H8N7 513 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ABCB10Q9NRK6 738 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ADPRHL2Q9NX46 363 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 MRPL39Q9NYK5 338 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 TMEM181Q9P2C4 612 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 EIF3KQ9UBQ5 218 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 CD300AQ9UGN4 299 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 GLS2Q9UI32 602 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF639Q9UID6 485 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 PDE10AQ9Y233 779 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 PEX16Q9Y5Y5 336 aa7.65□□□□□ -1.18
HDAC6-234ENST00000493923 COPG1Q9Y678 874 aaKnown RBP7.65□□□□□ -1.18
HDAC6-234ENST00000493923 FBN2P35556 2912 aa7.65□□□□□ -1.19
HDAC6-234ENST00000493923 FEZF1A0PJY2 475 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 LINC00862A6NCI5 91 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ANKUB1A6NFN9 424 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CLDN24A6NM45 220 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 IDSB3KWA1 339 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 DLGAP1O14490 977 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TIPRLO75663 272 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TSPAN12O95859 305 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 PAHP00439 452 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CATP04040 527 aaKnown RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 PRR35P0CG20 571 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ITGAMP11215 1152 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 MLNP12872 115 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 HSD17B1P14061 328 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ACPPP15309 386 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CRHBPP24387 322 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 KRT20P35900 424 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 BCL6P41182 706 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ETV6P41212 452 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms