RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 LDLRP01130 860 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 EFNA1P20827 205 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-207ENST00000490696 GPC1P35052 558 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 CASP3P42574 277 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 CA7P43166 264 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 CLDN8P56748 225 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 PSPHP78330 225 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 ZNF155Q12901 538 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-207ENST00000490696 MLC1Q15049 377 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 CPTPQ5TA50 214 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 C1QL3Q5VWW1 255 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 TMEM81Q6P7N7 255 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 LARP4Q71RC2 724 aaKnown RBP eCLIP14.11□□□□□ -0.15
VPS26A-207ENST00000490696 NUP54Q7Z3B4 507 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 SPPL2CQ8IUH8 684 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 SLC44A2Q8IWA5 706 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-207ENST00000490696 FAM109AQ8N4B1 249 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 OR4N2Q8NGD1 307 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 ZNF75CPQ92670 426 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-207ENST00000490696 SLC35A4Q96G79 324 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 MAGED4Q96JG8 741 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 ANGPTL4Q9BY76 406 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 DEFB127Q9H1M4 99 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 ZFP64Q9NPA5 681 aa14.11□□□□□ -0.15
VPS26A-207ENST00000490696 MARCOQ9UEW3 520 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-207ENST00000490696 BOKQ9UMX3 212 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-207ENST00000490696 A0A1B0GUH1 482 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 OR6C70A6NIJ9 312 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 HMGB1P1B2RPK0 211 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 ZNHIT1O43257 154 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 TSPAN2O60636 221 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 RFPL3SP0C7P2 107 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 LBPP18428 481 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 MAGEA5P43359 124 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 RPP38P78345 283 aaKnown RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 C3AR1Q16581 482 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 FNDC7Q5VTL7 733 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 OGFOD2Q6N063 350 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 WDR53Q7Z5U6 358 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 CAMKMTQ7Z624 323 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 WDR75Q8IWA0 830 aaKnown RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 HOXB13Q92826 284 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 RILPQ96NA2 401 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 COL21A1Q96P44 957 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 PSMG3-AS1Q96PY0 264 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 NODALQ96S42 347 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 PRPF18Q99633 342 aaKnown RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 LMF2Q9BU23 707 aaKnown RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 ZNF703Q9H7S9 590 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 SIRT3Q9NTG7 399 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 ATAD3AQ9NVI7 634 aa14.1□□□□□ -0.15
VPS26A-207ENST00000490696 NUP214P35658 2090 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-207ENST00000490696 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 TRGV8A0A0C4DH27 118 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 A0A1B0GTH9 108 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 A0A1W2PRB8 838 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 TRPC5OSA6NMA1 111 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 SLCO1B7G3V0H7 640 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 ANKRD28O15084 1053 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 CDC40O60508 579 aaKnown RBP eCLIP14.09□□□□□ -0.15
VPS26A-207ENST00000490696 REM1O75628 298 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 PDE9AO76083 593 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 SNX4O95219 450 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 IGHG3P01860 377 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 CELA3AP09093 270 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 KITP10721 976 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 PTGDSP41222 190 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 MAP3K8P41279 467 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 CYP27C1Q4G0S4 372 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 FJX1Q86VR8 437 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 NATD1Q8N6N6 113 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 GOLGA6L1Q8N7Z2 621 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 PSMA8Q8TAA3 256 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 RNF138Q8WVD3 245 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 GIMAP5Q96F15 307 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 ZNF597Q96LX8 424 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 JSRP1Q96MG2 331 aaPredicted RBP14.09□□□□□ -0.15
VPS26A-207ENST00000490696 ADOQ96SZ5 270 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 BHLHE41Q9C0J9 482 aaPredicted RBP14.09□□□□□ -0.15
VPS26A-207ENST00000490696 TINAGQ9UJW2 476 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 MAPRE3Q9UPY8 281 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 OR10H1Q9Y4A9 318 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 LIPGQ9Y5X9 500 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 PCNX1Q96RV3 2341 aa14.09□□□□□ -0.15
VPS26A-207ENST00000490696 TEX15Q9BXT5 2789 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 TTC36A6NLP5 189 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 ZNF195O14628 629 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 EMC8O43402 210 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 ALDOCP09972 364 aaKnown RBP14.08□□□□□ -0.16
VPS26A-207ENST00000490696 ABOP16442 354 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 EPHA3P29320 983 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 PTGS2P35354 604 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 PNLIPRP2P54317 469 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 SNTA1Q13424 505 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 GAB1Q13480 694 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 SLC10A1Q14973 349 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 TMEM198Q66K66 360 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 ARHGAP11AQ6P4F7 1023 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 TRILQ7L0X0 811 aa14.08□□□□□ -0.16
VPS26A-207ENST00000490696 MAVSQ7Z434 540 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms