RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 GRID1Q9ULK0 1009 aa4.26□□□□□ -1.73
SSX2IP-208ENST00000490476 STRAPQ9Y3F4 350 aaKnown RBP4.26□□□□□ -1.73
SSX2IP-208ENST00000490476 TNFRSF18Q9Y5U5 241 aa4.26□□□□□ -1.73
SSX2IP-208ENST00000490476 FER1L5A0AVI2 2057 aa4.26□□□□□ -1.73
SSX2IP-208ENST00000490476 PLXNA2O75051 1894 aa4.26□□□□□ -1.73
SSX2IP-208ENST00000490476 TENM3Q9P273 2699 aa4.26□□□□□ -1.73
SSX2IP-208ENST00000490476 MYH9P35579 1960 aaKnown RBP4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 MYH10P35580 1976 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 MYO7BQ6PIF6 2116 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 CNTNAP2Q9UHC6 1331 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 A8MVM7 634 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 LAD1O00515 517 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 HSF2BPO75031 334 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 ATP6V1G1O75348 118 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 GRAP2O75791 330 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 CDC123O75794 336 aaPredicted RBP4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 STAM2O75886 525 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 GPIP06744 558 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 YES1P07947 543 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 ABHD2P08910 425 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 PRKAR1AP10644 381 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 FERP16591 822 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 UGT1A6P19224 532 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 TYMPP19971 482 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 SLC1A4P43007 532 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 MAGEA11P43364 429 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 BPIFB3P59826 476 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 RPP38P78345 283 aaKnown RBP4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 PHEXP78562 749 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 SLC3A1Q07837 685 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 PDE7AQ13946 482 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 TMEM132DQ14C87 1099 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 TGIF1Q15583 401 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 KIAA1644Q3SXP7 199 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 FGD3Q5JSP0 725 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 KIAA1161Q6NSJ0 714 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 TRMT1LQ7Z2T5 733 aaKnown RBP4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 COX8CQ7Z4L0 72 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 VASH2Q86V25 355 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 LAX1Q8IWV1 398 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 NIPA2Q8N8Q9 360 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 TMEM178AQ8NBL3 297 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 URGCPQ8TCY9 931 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 SDR42E1Q8WUS8 393 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 PRCCQ92733 491 aaPredicted RBP4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 GGHQ92820 318 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 LPAR4Q99677 370 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 CRNKL1Q9BZJ0 848 aaKnown RBP4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 PLA2G12AQ9BZM1 189 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 THAP2Q9H0W7 228 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 ABCG4Q9H172 646 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 CXXC4Q9H2H0 198 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 ZNF556Q9HAH1 456 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 SLC52A3Q9NQ40 469 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 EPHA6Q9UF33 1036 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 IL36AQ9UHA7 158 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 IL19Q9UHD0 177 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 POMT2Q9UKY4 750 aa4.25□□□□□ -1.73
SSX2IP-208ENST00000490476 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 A0A1W2PNU3 283 aaPredicted RBP4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 FAM172BPA6NC97 362 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 PSMD3O43242 534 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 JAK2O60674 1132 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 CALCAP01258 141 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 SLC4A1P02730 911 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 MT-ND2P03891 347 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 CHRNGP07510 517 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 HMBSP08397 361 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 NUDT17P0C025 328 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 UQCRFS1P1P0C7P4 283 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 ZNF853P0CG23 659 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 PCP11498 1178 aaKnown RBP4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 PPP2R1AP30153 589 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 OR3A3P47888 321 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 OR1G1P47890 313 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 IL1RL1Q01638 556 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 SP4Q02446 784 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 RUNX3Q13761 415 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 PDK1Q15118 436 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 ZNF74Q16587 644 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 XKR6Q5GH73 641 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 FFAR4Q5NUL3 377 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 METTL7BQ6UX53 244 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 C17orf107Q6ZR85 190 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 FCRLAQ7L513 359 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 SMIM29Q86T20 159 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 ZC3H3Q8IXZ2 948 aaKnown RBP4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 ARL14Q8N4G2 192 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 OR10V1Q8NGI7 309 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 OR2T11Q8NH01 316 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 OR1L3Q8NH93 324 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 DNASE2BQ8WZ79 361 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 ULK4Q96C45 1275 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 GIMAP5Q96F15 307 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 RIOK1Q9BRS2 568 aaKnown RBP4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 UBAC1Q9BSL1 405 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 SPXQ9BT56 116 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 MMP28Q9H239 520 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 MAGEF1Q9HAY2 307 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms