RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 LILRB4Q8NHJ6 448 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 AGR3Q8TD06 166 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 ELP4Q96EB1 424 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 TSSK3Q96PN8 268 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 CCT7Q99832 543 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 TTYH2Q9BSA4 534 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 OSBPL11Q9BXB4 747 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 CENPHQ9H3R5 247 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 REEP4Q9H6H4 257 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 KCNJ16Q9NPI9 418 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 DDX18Q9NVP1 670 aaKnown RBP16.31■□□□□ 0.2
ABCF3-217ENST00000489719 SH3BP4Q9P0V3 963 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 BAIAP2L1Q9UHR4 511 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 RAB21Q9UL25 225 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 C15orf41Q9Y2V0 281 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 PCDHGB3Q9Y5G1 929 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 UNC79Q9P2D8 2635 aa16.31■□□□□ 0.2
ABCF3-217ENST00000489719 PRAMEF25A6NGN4 478 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 TMEM114B3SHH9 223 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 FAM47E-STBD1D6RA91 191 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 PIP5K1BO14986 540 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 LSM1O15116 133 aaKnown RBP16.3■□□□□ 0.2
ABCF3-217ENST00000489719 TYROBPO43914 113 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 CBR3O75828 277 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 HPNP05981 417 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 DDX5P17844 614 aaKnown RBP16.3■□□□□ 0.2
ABCF3-217ENST00000489719 GPC1P35052 558 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 PTGER4P35408 488 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 GCKP35557 465 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 MC3RP41968 323 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 ASMTP46597 345 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 PNLIPRP2P54317 469 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 RPL38P63173 70 aaKnown RBP16.3■□□□□ 0.2
ABCF3-217ENST00000489719 ZNF844Q08AG5 666 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 SF3B4Q15427 424 aaKnown RBP eCLIP16.3■□□□□ 0.2
ABCF3-217ENST00000489719 ZNHIT3Q15649 155 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-217ENST00000489719 UGT3A2Q3SY77 523 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 C1orf185Q5T7R7 199 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 FNDC7Q5VTL7 733 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 CCDC71Q8IV32 467 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-217ENST00000489719 MCEMP1Q8IX19 187 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 SLC35A4Q96G79 324 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 PPP3R2Q96LZ3 170 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 UBQLN3Q9H347 655 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 GTF3C1Q12789 2109 aa16.3■□□□□ 0.2
ABCF3-217ENST00000489719 AHRRA9YTQ3 701 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 TMEM233B4DJY2 109 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 UPK1AO00322 258 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 SNPHO15079 494 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 PDPK1O15530 556 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 TSPAN2O60636 221 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 PEX11AO75192 247 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 GLI4P10075 376 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 SDC1P18827 310 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 ENDOUP21128 410 aaKnown RBP16.29■□□□□ 0.2
ABCF3-217ENST00000489719 MAPK1P28482 360 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 MANFP55145 182 aaKnown RBP16.29■□□□□ 0.2
ABCF3-217ENST00000489719 CYP27C1Q4G0S4 372 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 NPSR1Q6W5P4 371 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 R3HCC1LQ7Z5L2 792 aaKnown RBP16.29■□□□□ 0.2
ABCF3-217ENST00000489719 CROCCP2Q86T23 111 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 ZFP28Q8NHY6 868 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 NTNG2Q96CW9 530 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 DTNBP1Q96EV8 351 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 FCRL1Q96LA6 429 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 TIMP4Q99727 224 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 GALNT9Q9HCQ5 603 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 ZDHHC2Q9UIJ5 367 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 MRTO4Q9UKD2 239 aaKnown RBP16.29■□□□□ 0.2
ABCF3-217ENST00000489719 SLC6A5Q9Y345 797 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 NOTCH2Q04721 2471 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 NBPF19A0A087WUL8 3843 aa16.29■□□□□ 0.2
ABCF3-217ENST00000489719 WDR91A4D1P6 747 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 C19orf84I3L1E1 186 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 TBX19O60806 448 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 BCKDHAP12694 445 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 PTPN6P29350 595 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 PTGDSP41222 190 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 ETV4P43268 484 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 KIR3DL1P43629 444 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 ZFP36L2P47974 494 aaKnown RBP16.28■□□□□ 0.2
ABCF3-217ENST00000489719 SERPINB4P48594 390 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 PSG6Q00889 435 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 HSPB3Q12988 150 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 DECR1Q16698 335 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 EIPR1Q53HC9 387 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 WIPI1Q5MNZ9 446 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-217ENST00000489719 CEP85LQ5SZL2 805 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 RTL6Q6ICC9 239 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 ANKRD26P1Q6NSI1 321 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 ZNF551Q7Z340 670 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-217ENST00000489719 YRDCQ86U90 279 aaKnown RBP16.28■□□□□ 0.2
ABCF3-217ENST00000489719 EXOC3L1Q86VI1 746 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 PM20D2Q8IYS1 436 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 ULK2Q8IYT8 1036 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 OR2L13Q8N349 312 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 OR4N2Q8NGD1 307 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 CEP70Q8NHQ1 597 aa16.28■□□□□ 0.2
ABCF3-217ENST00000489719 CLHC1Q8NHS4 586 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms