RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ATG13O75143 517 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 POP4O95707 220 aaKnown RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 SLC16A8O95907 504 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 PAHP00439 452 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 TYRP14679 529 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 DNASE1P24855 282 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 NNMTP40261 264 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 LIM2P55344 173 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 MC1RQ01726 317 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 DUSP6Q16828 381 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 SYTL3Q4VX76 610 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 SPIN4Q56A73 249 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 LY6G5CQ5SRR4 150 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 IER5LQ5T953 404 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 UNC80Q8N2C7 3258 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 MS4A15Q8N5U1 240 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 BADQ92934 168 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 RIT1Q92963 219 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 CHFRQ96EP1 664 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 RIOK2Q9BVS4 552 aaKnown RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 TDP1Q9NUW8 608 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 EXTL2Q9UBQ6 330 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 GLS2Q9UI32 602 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 KIF25Q9UIL4 384 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 ANGPT4Q9Y264 503 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 WNT6Q9Y6F9 365 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 GRM6O15303 877 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 UGDHO60701 494 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 EPCAMP16422 314 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 SEC23BQ15437 767 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 STK11Q15831 433 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 NTRK2Q16620 822 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 TMEM215Q68D42 235 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 OR5AK3PQ8NH89 298 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 NEIL3Q8TAT5 605 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 CYB5D2Q8WUJ1 264 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 ACOT12Q8WYK0 555 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 FBXW5Q969U6 566 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 SGTBQ96EQ0 304 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 LRR1Q96L50 414 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 NLNQ9BYT8 704 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 BHLHE41Q9C0J9 482 aaPredicted RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 SHARPINQ9H0F6 387 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 MTG2Q9H4K7 406 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 ATPIF1Q9UII2 106 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 SLC25A13Q9UJS0 675 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 hCG_1807616A0A1W2PRN6 198 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 PCP4L1A6NKN8 68 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 FAAHO00519 579 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 NCR1O76036 304 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 RECKO95980 971 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 HLA-DPB1P04440 258 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 ACSM4P0C7M7 580 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 ELK1P19419 428 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 PDHA2P29803 388 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 CHI3L1P36222 383 aaPredicted RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 CTSCP53634 463 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 DCDC1P59894 354 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 RAB40BQ12829 278 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 PUM1Q14671 1186 aaKnown RBP eCLIP13.39□□□□□ -0.27
RER1-207ENST00000488353 GRHL2Q6ISB3 625 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 BHLHB9Q6PI77 547 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 GDPD4Q6W3E5 623 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 SLC9A6Q92581 669 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 IRF7Q92985 503 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 CIDECQ96AQ7 238 aaPredicted RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 ZNF582Q96NG8 517 aaPredicted RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 TEFMQ96QE5 360 aaKnown RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 ARHGAP9Q9BRR9 750 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 DPAGT1Q9H3H5 408 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 FGF20Q9NP95 211 aaPredicted RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 MRPS18AQ9NVS2 196 aaKnown RBP13.39□□□□□ -0.27
RER1-207ENST00000488353 NUBP2Q9Y5Y2 271 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 CACNG2Q9Y698 323 aa13.39□□□□□ -0.27
RER1-207ENST00000488353 TEX13CA0A0J9YWL9 993 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 M0R233 179 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 KPNA5O15131 536 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 CASC3O15234 703 aaKnown RBP13.38□□□□□ -0.27
RER1-207ENST00000488353 C6orf47O95873 294 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 CFDP00746 253 aaPredicted RBP13.38□□□□□ -0.27
RER1-207ENST00000488353 ELAVL4P26378 380 aaKnown RBP13.38□□□□□ -0.27
RER1-207ENST00000488353 NUP62P37198 522 aaPredicted RBP13.38□□□□□ -0.27
RER1-207ENST00000488353 DGKGP49619 791 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 B2MP61769 119 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 ZNF273Q14593 569 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 HSD17B12Q53GQ0 312 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 FAM180BQ6P0A1 224 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 GET4Q7L5D6 327 aaPredicted RBP13.38□□□□□ -0.27
RER1-207ENST00000488353 TMPRSS11BQ86T26 416 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 CELF5Q8N6W0 485 aaKnown RBP13.38□□□□□ -0.27
RER1-207ENST00000488353 NEIL2Q969S2 332 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 CXorf40BQ96DE9 158 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 SPHK2Q9NRA0 654 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
RER1-207ENST00000488353 GULP1Q9UBP9 304 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms