RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 PPP3R2Q96LZ3 170 aa11.19□□□□□ -0.62
OPTN-212ENST00000487935 EBPLQ9BY08 206 aa11.19□□□□□ -0.62
OPTN-212ENST00000487935 ZNF717Q9BY31 904 aaPredicted RBP11.19□□□□□ -0.62
OPTN-212ENST00000487935 POLDIP3Q9BY77 421 aaKnown RBP11.19□□□□□ -0.62
OPTN-212ENST00000487935 C1orf109Q9NX04 203 aa11.19□□□□□ -0.62
OPTN-212ENST00000487935 GIMAP2Q9UG22 337 aa11.19□□□□□ -0.62
OPTN-212ENST00000487935 POLR3HQ9Y535 204 aaPredicted RBP11.19□□□□□ -0.62
OPTN-212ENST00000487935 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 C15orf38-AP3S2A0A0A6YYH1 394 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 C2orf92A0A1B0GVN3 265 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 A0A1W2PR48 441 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 ANKRD33BA6NCL7 494 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 TRPC5OSA6NMA1 111 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 WASHC1A8K0Z3 465 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 AHRRA9YTQ3 701 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 SLCO1B7G3V0H7 640 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 SYT5O00445 386 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 DVL2O14641 736 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 POLR3GO15318 223 aaPredicted RBP11.18□□□□□ -0.62
OPTN-212ENST00000487935 HDAC3O15379 428 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 TRIM3O75382 744 aaPredicted RBP11.18□□□□□ -0.62
OPTN-212ENST00000487935 SEC22BO75396 215 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 CTAG2O75638 210 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 AIFM1O95831 613 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 CLPSP04118 112 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 VIMP08670 466 aaKnown RBP11.18□□□□□ -0.62
OPTN-212ENST00000487935 SLC35E2P0CK97 266 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 TIA1P31483 386 aaKnown RBP eCLIP11.18□□□□□ -0.62
OPTN-212ENST00000487935 UQCRC1P31930 480 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 TMED10P49755 219 aaKnown RBP11.18□□□□□ -0.62
OPTN-212ENST00000487935 MAPK12P53778 367 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 DUSP8Q13202 625 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 RPS6KA2Q15349 733 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 ATP6AP1LQ52LC2 224 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 HLA-DQA1Q5Y7H0 255 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 OR52E8Q6IFG1 317 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 SEM1Q6ZVN7 128 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 WDR75Q8IWA0 830 aaKnown RBP11.18□□□□□ -0.62
OPTN-212ENST00000487935 CDC26Q8NHZ8 85 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 C3orf30Q96M34 536 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 CCT7Q99832 543 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 FOXC2Q99958 501 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 ADAM29Q9UKF5 820 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 CCL27Q9Y4X3 112 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 NPFFR2Q9Y5X5 522 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 USH1CQ9Y6N9 552 aa11.18□□□□□ -0.62
OPTN-212ENST00000487935 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 NINQ8N4C6 2090 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 GNG14A0A1W2PPG7 69 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 LSM1O15116 133 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 EDF1O60869 148 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 DIAPH2O60879 1101 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 PEX11AO75192 247 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 TRAPPC6AO75865 159 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 SNX4O95219 450 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 EPPINO95925 133 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 CD99P14209 185 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 BMP5P22003 454 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 PRPH2P23942 346 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 PIK3R1P27986 724 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 SSTR4P31391 388 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 TIMP3P35625 211 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 ASCL1P50553 236 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 GYS2P54840 703 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 NRG3P56975 720 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 FBXW4P57775 412 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 RPP38P78345 283 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 CRYZQ08257 329 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 SNTB1Q13884 538 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 SF3B4Q15427 424 aaKnown RBP eCLIP11.17□□□□□ -0.62
OPTN-212ENST00000487935 ACSF3Q4G176 576 aaPredicted RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 C6orf163Q5TEZ5 329 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 Q6ZSR9 355 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 GALNT12Q8IXK2 581 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 PM20D2Q8IYS1 436 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 ZNF441Q8N8Z8 693 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 FNDC5Q8NAU1 212 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 RELL2Q8NC24 303 aaPredicted RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 CHDHQ8NE62 594 aaPredicted RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 SPPL2AQ8TCT8 520 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 UCN3Q969E3 161 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 THOC1Q96FV9 657 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 SECISBP2Q96T21 854 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 GPATCH1Q9BRR8 931 aaKnown RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 CXorf21Q9HAI6 301 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 CCM2LQ9NUG4 571 aaPredicted RBP11.17□□□□□ -0.62
OPTN-212ENST00000487935 ST6GALNAC2Q9UJ37 374 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 MCM8Q9UJA3 840 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 EDARQ9UNE0 448 aa11.17□□□□□ -0.62
OPTN-212ENST00000487935 GOLGA8QA0A0J9YX86 632 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 FAM221AA4D161 298 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 GOLGA8OA6NCC3 632 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 NPIPB8E9PQR5 432 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 GOLGA8NF8WBI6 632 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 SDHDO14521 159 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 PGRMC2O15173 223 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 GUCY1B2O75343 617 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 IL2RAP01589 272 aa11.16□□□□□ -0.62
OPTN-212ENST00000487935 ANXA4P09525 319 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms