RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 OR4F17Q8NGA8 305 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 MARCH1Q8TCQ1 289 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 C18orf25Q96B23 403 aaPredicted RBP1.98□□□□□ -2.09
RBM39-234ENST00000487604 RPGRIP1Q96KN7 1286 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 CCDC114Q96M63 670 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 OR4F4Q96R69 305 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 CITED2Q99967 270 aaPredicted RBP1.98□□□□□ -2.09
RBM39-234ENST00000487604 GLT8D2Q9H1C3 349 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 PTGES2Q9H7Z7 377 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 VPS54Q9P1Q0 977 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 BARX2Q9UMQ3 279 aaPredicted RBP1.98□□□□□ -2.09
RBM39-234ENST00000487604 PRG3Q9Y2Y8 225 aaPredicted RBP1.98□□□□□ -2.09
RBM39-234ENST00000487604 PPIAL4AQ9Y536 164 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 WSB1Q9Y6I7 421 aa1.98□□□□□ -2.09
RBM39-234ENST00000487604 USP27XA6NNY8 438 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 LYPLA1O75608 230 aaPredicted RBP1.97□□□□□ -2.09
RBM39-234ENST00000487604 PTBP1P26599 531 aaKnown RBP eCLIP1.97□□□□□ -2.09
RBM39-234ENST00000487604 HTR1FP30939 366 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 PFN3P60673 137 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 HERV-K104P63124 156 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 GK2Q14410 553 aaPredicted RBP1.97□□□□□ -2.09
RBM39-234ENST00000487604 STXBP2Q15833 593 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 CAMK4Q16566 473 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 ZNF789Q5FWF6 425 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 CXCL17Q6UXB2 119 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 GBP6Q6ZN66 633 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 FRA10AC1Q70Z53 315 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 Q7L0L9 218 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 HOOK3Q86VS8 718 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 STHQ8IWL8 128 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 ARIH2OSQ8N7S6 290 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 CCDC89Q8N998 374 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 ACCSQ96QU6 501 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 NRTNQ99748 197 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 CNPY3Q9BT09 278 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 ZNF350Q9GZX5 532 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 MAGEF1Q9HAY2 307 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 DNAJB9Q9UBS3 223 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 TRMT6Q9UJA5 497 aaKnown RBP1.97□□□□□ -2.09
RBM39-234ENST00000487604 KLHDC2Q9Y2U9 406 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 CACNG2Q9Y698 323 aa1.97□□□□□ -2.09
RBM39-234ENST00000487604 A0A0J9YVX5 310 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 C13orf42A0A1B0GVH6 325 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 ABCD4O14678 606 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 GMNNO75496 209 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 SCG2P13521 617 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 BDNFP23560 247 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 FCARP24071 287 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 RPS10P46783 165 aaKnown RBP1.96□□□□□ -2.1
RBM39-234ENST00000487604 RAG2P55895 527 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 RPL32P62910 135 aaKnown RBP1.96□□□□□ -2.1
RBM39-234ENST00000487604 NPRL3Q12980 569 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 GPNMBQ14956 572 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 C16orf72Q14CZ0 275 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 ANKRD20A4Q4UJ75 823 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 ANKRD20A8PQ5CZ79 823 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 ANKRD20A2Q5SQ80 823 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 ANKRD20A1Q5TYW2 823 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 ANKRD20A3Q5VUR7 823 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 MEDAGQ5VYS4 303 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 ZNF57Q68EA5 555 aaPredicted RBP1.96□□□□□ -2.1
RBM39-234ENST00000487604 SULT1C3Q6IMI6 304 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 TSEN54Q7Z6J9 526 aaKnown RBP1.96□□□□□ -2.1
RBM39-234ENST00000487604 PYROXD2Q8N2H3 581 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 TEKT1Q969V4 418 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 DDX50Q9BQ39 737 aaKnown RBP1.96□□□□□ -2.1
RBM39-234ENST00000487604 UTP14AQ9BVJ6 771 aaKnown RBP1.96□□□□□ -2.1
RBM39-234ENST00000487604 DCLRE1BQ9H816 532 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 MEPEQ9NQ76 525 aaPredicted RBP1.96□□□□□ -2.1
RBM39-234ENST00000487604 ACOXLQ9NUZ1 547 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 PTPRUQ92729 1446 aa1.96□□□□□ -2.1
RBM39-234ENST00000487604 A0A0A6YYC8 382 aaPredicted RBP1.95□□□□□ -2.1
RBM39-234ENST00000487604 I3L1I5 382 aaPredicted RBP1.95□□□□□ -2.1
RBM39-234ENST00000487604 TBCAO75347 108 aaKnown RBP1.95□□□□□ -2.1
RBM39-234ENST00000487604 NF2P35240 595 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 EOGTQ5NDL2 527 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 DCST2Q5T1A1 773 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 FAM47EQ6ZV65 393 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 SLC22A16Q86VW1 577 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 ZBTB44Q8NCP5 570 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 P3H4Q92791 437 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 DLX4Q92988 240 aaPredicted RBP1.95□□□□□ -2.1
RBM39-234ENST00000487604 APOOQ9BUR5 198 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 ABCG8Q9H221 673 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 NXF3Q9H4D5 531 aaKnown RBP1.95□□□□□ -2.1
RBM39-234ENST00000487604 NECAP2Q9NVZ3 263 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 ELOVL2Q9NXB9 296 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 ONECUT1Q9UBC0 465 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 ZNF282Q9UDV7 671 aaPredicted RBP1.95□□□□□ -2.1
RBM39-234ENST00000487604 ZNF223Q9UK11 482 aaPredicted RBP1.95□□□□□ -2.1
RBM39-234ENST00000487604 PSG11Q9UQ72 335 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 PARD3Q8TEW0 1356 aa1.95□□□□□ -2.1
RBM39-234ENST00000487604 USP6P35125 1406 aa1.94□□□□□ -2.1
RBM39-234ENST00000487604 KIR2DL5BA0A0G2JN68 375 aa1.94□□□□□ -2.1
RBM39-234ENST00000487604 KIR2DL5BA0A0G2JPC4 375 aa1.94□□□□□ -2.1
RBM39-234ENST00000487604 TRBV7-9A0A0J9YWB2 115 aa1.94□□□□□ -2.1
RBM39-234ENST00000487604 HSPA4LO95757 839 aa1.94□□□□□ -2.1
RBM39-234ENST00000487604 SDC1P18827 310 aa1.94□□□□□ -2.1
RBM39-234ENST00000487604 GPC3P51654 580 aa1.94□□□□□ -2.1
RBM39-234ENST00000487604 NUP107P57740 925 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms