RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 APIPQ96GX9 242 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 VSTM2LQ96N03 204 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 COL21A1Q96P44 957 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 ZNF382Q96SR6 550 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 ADOQ96SZ5 270 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 G6PC3Q9BUM1 346 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 PFDN4Q9NQP4 134 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 FBXL2Q9UKC9 423 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 B4DXG7 233 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 EEF1E1-BLOC1S5C9J1V9 151 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 EEF1E1O43324 174 aaKnown RBP11.08□□□□□ -0.64
VPS16-208ENST00000487461 PCDH7O60245 1069 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 ZNF500O60304 480 aaPredicted RBP11.08□□□□□ -0.64
VPS16-208ENST00000487461 TSPAN2O60636 221 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 BCAS2O75934 225 aaPredicted RBP11.08□□□□□ -0.64
VPS16-208ENST00000487461 TMIGD3P0DMS9 266 aaPredicted RBP11.08□□□□□ -0.64
VPS16-208ENST00000487461 ATP5F1P24539 256 aaPredicted RBP11.08□□□□□ -0.64
VPS16-208ENST00000487461 DNASE1P24855 282 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 HMOX2P30519 316 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 DGKQP52824 942 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 GFRA1P56159 465 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 BTKQ06187 659 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 PRSS53Q2L4Q9 553 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 KRTAP21-3Q3LHN1 58 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 OR5M10Q6IEU7 315 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 SCIMPQ6UWF3 145 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 NPSR1Q6W5P4 371 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 ADGRE4PQ86SQ3 457 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 KIF18BQ86Y91 864 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 PLCZ1Q86YW0 608 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 TGIF2LYQ8IUE0 185 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 GBP7Q8N8V2 638 aaPredicted RBP11.08□□□□□ -0.64
VPS16-208ENST00000487461 MNS1Q8NEH6 495 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 ERP27Q96DN0 273 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 C11orf24Q96F05 449 aaPredicted RBP11.08□□□□□ -0.64
VPS16-208ENST00000487461 SLC35A4Q96G79 324 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 BTBD9Q96Q07 612 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 SLC35C2Q9NQQ7 365 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 TAS2R10Q9NYW0 307 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 NFU1Q9UMS0 254 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 TIMM22Q9Y584 194 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 DOCK7Q96N67 2140 aa11.08□□□□□ -0.64
VPS16-208ENST00000487461 ACANP16112 2415 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 GNG14A0A1W2PPG7 69 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 CLCA1A8K7I4 914 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 C17orf51A8MQB3 221 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 H0Y3Z8 333 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 GOLGA8RI6L899 631 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 ZIC3O60481 467 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 ERN1O75460 977 aaKnown RBP11.07□□□□□ -0.64
VPS16-208ENST00000487461 RCBTB2O95199 551 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 ABHD2P08910 425 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 KLK2P20151 261 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 SRD5A2P31213 254 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 GCKP35557 465 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 LHX2P50458 406 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 GAS1P54826 345 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 ACSM2AQ08AH3 577 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 EFR3AQ14156 821 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 SPIN4Q56A73 249 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 ACSM2BQ68CK6 577 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 GALNT18Q6P9A2 607 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 ENPP6Q6UWR7 440 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 LARP4Q71RC2 724 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS16-208ENST00000487461 CHDHQ8NE62 594 aaPredicted RBP11.07□□□□□ -0.64
VPS16-208ENST00000487461 OR7G2Q8NG99 324 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 OR4N2Q8NGD1 307 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 WNT2BQ93097 391 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 INTS12Q96CB8 462 aaKnown RBP11.07□□□□□ -0.64
VPS16-208ENST00000487461 MTBPQ96DY7 904 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 L3HYPDHQ96EM0 354 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 KCNA7Q96RP8 456 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 TM9SF2Q99805 663 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 EBPLQ9BY08 206 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 FOLH1BQ9HBA9 442 aa11.07□□□□□ -0.64
VPS16-208ENST00000487461 MRPS18CQ9Y3D5 142 aaKnown RBP11.07□□□□□ -0.64
VPS16-208ENST00000487461 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 MAP1AP78559 2803 aaPredicted RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 SERTM1A2A2V5 107 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 UBFD1O14562 309 aaKnown RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 RIPK2O43353 540 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 PLOD3O60568 738 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 ABCB7O75027 752 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 ANXA4P09525 319 aaPredicted RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 PYGBP11216 843 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 GRK2P25098 689 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 TIA1P31483 386 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS16-208ENST00000487461 MPIP34949 423 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 PNLIPRP2P54317 469 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 FOXA1P55317 472 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 PKNOX1P55347 436 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 CLDN18P56856 261 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 B3GALT5-AS1P59052 145 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 SORDQ00796 357 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 C2orf80Q0P641 193 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 LCP2Q13094 533 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 HEPACAMQ14CZ8 416 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms