RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 NTRK2Q16620 822 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 ZNF791Q3KP31 576 aaPredicted RBP17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 ZNF227Q86WZ6 799 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC44A2Q8IWA5 706 aaPredicted RBP17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC34A3Q8N130 599 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 CLEC4FQ8N1N0 589 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC16A11Q8NCK7 471 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 MDS2Q8NDY4 140 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 RP9Q8TA86 221 aaKnown RBP17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 ZFP90Q8TF47 636 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 SPACA9Q96E40 222 aaPredicted RBP17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC35G5Q96KT7 338 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 Q9N2J8 555 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC6A13Q9NSD5 602 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 HPF1Q9NWY4 346 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 PCDHB14Q9Y5E9 798 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 PCDHGB6Q9Y5F9 930 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 GMEB1Q9Y692 573 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 EPG5Q9HCE0 2579 aa17.87■□□□□ 0.45
PCOLCE-208ENST00000487172 BBIP1A8MTZ0 92 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 PPM1BO75688 479 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 KCNH1O95259 989 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 ALOX5P09917 674 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 ACP2P11117 423 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 MATN1P21941 496 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 GABRA3P34903 492 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 CHI3L1P36222 383 aaPredicted RBP17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 MAN2A2P49641 1150 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 STX5Q13190 355 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 OR1C1Q15619 314 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 NNATQ16517 81 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 DUSP5Q16690 384 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 IL20RBQ6UXL0 311 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 WDR53Q7Z5U6 358 aaPredicted RBP17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 RETREG3Q86VR2 466 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 CYP4Z2PQ8N1L4 340 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 GOLM1Q8NBJ4 401 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 CCDC197Q8NCU1 140 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 CATSPER1Q8NEC5 780 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 ADAMTS15Q8TE58 950 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC9A6Q92581 669 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 SIGLEC12Q96PQ1 595 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 ANKRD10Q9NXR5 420 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 SLAMF8Q9P0V8 285 aa17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 DSPP15924 2871 aaKnown RBP17.86■□□□□ 0.45
PCOLCE-208ENST00000487172 TRBV5-3A0A0A0MS03 114 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 TRAV17A0A0B4J275 112 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 OR6C70A6NIJ9 312 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 ASNA1O43681 348 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 TSPAN2O60636 221 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 F10P00742 488 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 PIGAP37287 484 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 PNLIPRP2P54317 469 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 PLCXD2Q0VAA5 305 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 CYLC2Q14093 348 aaPredicted RBP17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 SPINK14Q6IE38 97 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 DLEU7Q6UYE1 221 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 DNAJC14Q6Y2X3 702 aaPredicted RBP17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 RTL4Q6ZR62 310 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 NUP54Q7Z3B4 507 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 OR4N2Q8NGD1 307 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 FAM110BQ8TC76 370 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 BCAS4Q8TDM0 211 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 GPR151Q8TDV0 419 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 OMA1Q96E52 524 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC35A4Q96G79 324 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 LRRC37BQ96QE4 947 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 OR7D2Q96RA2 312 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 SECISBP2Q96T21 854 aaKnown RBP17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 YIPF4Q9BSR8 244 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 SERHL2Q9H4I8 314 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 TPT1P8Q9HAU6 139 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 SH2D2AQ9NP31 389 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 MAP10Q9P2G4 905 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 MRTO4Q9UKD2 239 aaKnown RBP17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 CBLCQ9ULV8 474 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 KMT2BQ9UMN6 2715 aaPredicted RBP17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 B3GNT3Q9Y2A9 372 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 OR10H1Q9Y4A9 318 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 PCDHGB3Q9Y5G1 929 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 CSAG2Q9Y5P2 127 aa17.85■□□□□ 0.45
PCOLCE-208ENST00000487172 LOC100653049A0A140TA62 436 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 FBP2O00757 339 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 NDUFAB1O14561 156 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 ABCB7O75027 752 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 KRT34O76011 436 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 NPPAP01160 153 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 CD46P15529 392 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 PRDX6P30041 224 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 ST13P50502 369 aaKnown RBP17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 PSMD4P55036 377 aaKnown RBP17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 KLRB1Q12918 225 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 DECR1Q16698 335 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 GTDC1Q4AE62 458 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 FAM91A1Q658Y4 838 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 SLC25A25Q6KCM7 469 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 SNX32Q86XE0 403 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 TREML1Q86YW5 311 aa17.84■□□□□ 0.45
PCOLCE-208ENST00000487172 MSRB3Q8IXL7 192 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms