RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 IGLON5A6NGN9 336 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ARPC1BO15143 372 aaKnown RBP4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 TSPAN2O60636 221 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 DUSP11O75319 330 aaKnown RBP4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 FCER2P06734 321 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ARF4P18085 180 aaPredicted RBP4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF10P21506 573 aaPredicted RBP4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 PPP2R1AP30153 589 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 CHRNA3P32297 505 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 TRIM23P36406 574 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ASMTP46597 345 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 NPY2RP49146 381 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 NDUFV3P56181 108 aaKnown RBP4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 SPP2Q13103 211 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF528Q3MIS6 628 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 C14orf177Q52M58 125 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 AGKQ53H12 422 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 C2CD6Q53TS8 623 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 LDLRAP1Q5SW96 308 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 CST9Q5W186 159 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 RAET1GQ6H3X3 334 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 PRR5LQ6MZQ0 368 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 IRGCQ6NXR0 463 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF530Q6P9A1 599 aaPredicted RBP4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF613Q6PF04 617 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 FAM159AQ6UWV7 190 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ASRGL1Q7L266 308 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 RNF148Q8N7C7 305 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ICA1LQ8NDH6 482 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 PRSS33Q8NF86 280 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 OR4F5Q8NH21 305 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 TMEM37Q8WXS4 190 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 C14orf79Q96F83 325 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 C18orf12Q96KH6 178 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 AGAP3Q96P47 875 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 ACCSQ96QU6 501 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 IWS1Q96ST2 819 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 KCNK16Q96T55 309 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 NACA2Q9H009 215 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 TMEM231Q9H6L2 316 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 DCTPP1Q9H773 170 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 DEPPQ9NTK1 212 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 THYN1Q9P016 225 aa4.09□□□□□ -1.75
PRPF38A-203ENST00000487160 MKI67P46013 3256 aaKnown RBP4.09□□□□□ -1.76
PRPF38A-203ENST00000487160 LAMB2P55268 1798 aa4.09□□□□□ -1.76
PRPF38A-203ENST00000487160 ASB14A6NK59 587 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 H7C423 109 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 K7EQG2 157 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 TRIM49P0CI25 452 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 TRIM49CP0CI26 452 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 FUT1P19526 365 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 DNAJB1P25685 340 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 TMOD1P28289 359 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 PTPN4P29074 926 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 SLC6A8P48029 635 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 SLC1A6P48664 564 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 NUMBP49757 651 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 NDST1P52848 882 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 MYBPC1Q00872 1141 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 GABPB1Q06547 395 aaPredicted RBP4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 NME3Q13232 169 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 FASTKQ14296 549 aaKnown RBP4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 INAQ16352 499 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 MRGPRG-AS1Q2M3A8 158 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 DNAJC21Q5F1R6 531 aaKnown RBP4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 TCHHL1Q5QJ38 904 aaPredicted RBP4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 CEP85LQ5SZL2 805 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 IL23RQ5VWK5 629 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 OLFM4Q6UX06 510 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 FAM205AQ6ZU69 1335 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 FAM131BQ86XD5 332 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 BANPQ8N9N5 519 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 COLGALT1Q8NBJ5 622 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNRF1Q8ND25 227 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 OR56B1Q8NGI3 324 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 OR1K1Q8NGR3 316 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 FBXO25Q8TCJ0 367 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 U2AF1L4Q8WU68 220 aaKnown RBP4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 TAF4BQ92750 862 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 SLC45A3Q96JT2 553 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 ANKRD27Q96NW4 1050 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 TESK2Q96S53 571 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 NLNQ9BYT8 704 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 STRADBQ9C0K7 418 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 EGLN1Q9GZT9 426 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 LIME1Q9H400 295 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 NT5DC2Q9H857 520 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 MOB1AQ9H8S9 216 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 TAS2R3Q9NYW6 316 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 MIOXQ9UGB7 285 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 SZT2Q5T011 3432 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 CENPFP49454 3210 aa4.08□□□□□ -1.76
PRPF38A-203ENST00000487160 LAMB4A4D0S4 1761 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 DDX60Q8IY21 1712 aaKnown RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 SNED1Q8TER0 1413 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 SALL1Q9NSC2 1324 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 TRGV8A0A0C4DH27 118 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 RGSL1A5PLK6 1076 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 PDHXO00330 501 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms