RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CRB3Q9BUF7 120 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 TSSK1BQ9BXA7 367 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 RAB11FIP5Q9BXF6 653 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF160Q9HCG1 818 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ABI3Q9P2A4 366 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CTSFQ9UBX1 484 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 C3orf18Q9UK00 162 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC39A10Q9ULF5 831 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CDC14AQ9UNH5 594 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 MRPS2Q9Y399 296 aaKnown RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 MAU2Q9Y6X3 613 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 FAM169AQ9Y6X4 670 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 DCHS2Q6V1P9 2916 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 AKAP6Q13023 2319 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF407Q9C0G0 2248 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 LOC102723996A0A087X1L8 192 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 IGHV1-45A0A0A0MS14 117 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 A0A0B4J293 547 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TRGV8A0A0C4DH27 118 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 A0A0J9YVX5 310 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 A0A1W2PPV9 198 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 MACROD2A1Z1Q3 448 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 OR2A25A4D2G3 310 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 GOLGA6L9A6NEM1 432 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 BTNL10A8MVZ5 291 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 IDSB3KWA1 339 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 MS4A18H0YCH9 400 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CCL21O00585 134 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 PRMT5O14744 637 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 C1orf105O95561 183 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 WDPCPO95876 746 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 GAS8O95995 478 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 GOT2P00505 430 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 IGLV2-11P01706 119 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 COX6B1P14854 86 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CAPN3P20807 821 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 STIP1P31948 543 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CA7P43166 264 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TTPAP49638 278 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CSE1LP55060 971 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CASP6P55212 293 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 RELAQ04206 551 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 ACVR1Q04771 509 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 RBPJQ06330 500 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TMED2Q15363 201 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 SPA17Q15506 151 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 MRGPRG-AS1Q2M3A8 158 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CCDC38Q502W7 563 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 FASTKD1Q53R41 847 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 KRTCAP3Q53RY4 240 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 VWA2Q5GFL6 755 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 GARNL3Q5VVW2 1013 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 FRMPD2BQ6IN97 320 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CNSTQ6PJW8 725 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 AFTPHQ6ULP2 937 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TMEM205Q6UW68 189 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CREB3L2Q70SY1 520 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 H1FNTQ75WM6 255 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF534Q76KX8 674 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TMEM200AQ86VY9 491 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 LRRC6Q86X45 466 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 KLBQ86Z14 1044 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 RAB42Q8N4Z0 105 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 METTL27Q8N6F8 245 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TC2NQ8N9U0 490 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 DNAAF3Q8N9W5 541 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 OR2L3Q8NG85 312 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 OR52K1Q8NGK4 314 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 OR2A1Q8NGT9 310 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 GSDMBQ8TAX9 411 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 MAGEC3Q8TD91 643 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 C8orf44Q96CB5 159 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 IMMP1LQ96LU5 166 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 C10orf90Q96M02 699 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 FOPNLQ96NB1 174 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 IL17FQ96PD4 163 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 PANX3Q96QZ0 392 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 MKKSQ9NPJ1 570 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 C14orf105Q9NVL8 296 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 UTP6Q9NYH9 597 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 STMN3Q9NZ72 180 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 SEC14L3Q9UDX4 400 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TEKT2Q9UIF3 430 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TTC7AQ9ULT0 858 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 TFR2Q9UP52 801 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 ABCA4P78363 2273 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 ADGRG4Q8IZF6 3080 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 CELSR1Q9NYQ6 3014 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 HCFC1P51610 2035 aa3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 PHF3Q92576 2039 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-205ENST00000486941 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 IGLV5-52A0A0A0MRZ9 124 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 OR5H15A6NDH6 313 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 IQCF5A8MTL0 148 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 MIF4GDA9UHW6 222 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 H0YGG7 62 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 TXNDC9O14530 226 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC16A5O15375 505 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC19A2O60779 497 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 VPS26AO75436 327 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms