RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PCOLCE2Q9UKZ9 415 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 DIMT1Q9UNQ2 313 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 MTCH2Q9Y6C9 303 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 C5orf42Q9H799 3197 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 ATG2BQ96BY7 2078 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 PRUNE2Q8WUY3 3088 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 TBX1O43435 398 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 CYP7B1O75881 506 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 MED26O95402 600 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 HBQ1P09105 142 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 IFNGR2P38484 337 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 ETV6P41212 452 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 TNFRSF17Q02223 184 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 CDC20Q12834 499 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 TRAM2Q15035 370 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 OR52I1Q8NGK6 324 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 DIO2Q92813 273 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 ZG16BQ96DA0 208 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 ITPKCQ96DU7 683 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 WDR92Q96MX6 357 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 ANKRD19PQ9H560 264 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 QPCTLQ9NXS2 382 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 TESQ9UGI8 421 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 GPR55Q9Y2T6 319 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 TICRRQ7Z2Z1 1910 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 MYL12BO14950 172 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 NARSO43776 548 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 RAB36O95755 333 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 SLC35G6P0C7Q6 338 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 PRKAR1BP31321 381 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 MLLT11Q13015 90 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 C1DQ13901 141 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 TCEA2Q15560 299 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 SNAPC1Q16533 368 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 STEAP3Q658P3 488 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 HEPHL1Q6MZM0 1159 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 DGLUCYQ7Z3D6 616 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 MRGPREQ86SM8 312 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 CADM3Q8N126 398 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 LRRC25Q8N386 305 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 FLVCR1-AS1Q8TAF5 88 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 TEX47Q8TBZ9 253 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 ADAMTS15Q8TE58 950 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 SIPA1Q96FS4 1042 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 CNPPD1Q9BV87 410 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 PRR14Q9BWN1 585 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 PLA2G12AQ9BZM1 189 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 POLR2J2Q9GZM3 115 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 POLMQ9NP87 494 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 SEMA4GQ9NTN9 838 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 NDUFB11Q9NX14 153 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 NTMQ9P121 344 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 NCKAP1Q9Y2A7 1128 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 CA5BQ9Y2D0 317 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 CHST2Q9Y4C5 530 aa16.85■□□□□ 0.29
PDLIM7-207ENST00000486828 A0A075B6Q4 140 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 DUXAA6NLW8 204 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 FAM170BA6NMN3 283 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 H0Y8X5 98 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 FRS3O43559 492 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 ZIC2O95409 532 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 EGFP01133 1207 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 POU3F3P20264 500 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 PSMA1P25786 263 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CRYBB2P43320 205 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 ST3GAL3Q11203 375 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 TSPAN31Q12999 210 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 KIR2DS3Q14952 304 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 C6orf132Q5T0Z8 1188 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 FBXO42Q6P3S6 717 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 FAM111BQ6SJ93 734 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 USP30Q70CQ3 517 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 PRICKLE2Q7Z3G6 844 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 RD3Q7Z3Z2 195 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 DEFB123Q8N688 67 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CCL4L1Q8NHW4 92 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 TMEM163Q8TC26 289 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 TM4SF19Q96DZ7 209 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SLC35A4Q96G79 324 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 MS4A4EQ96PG1 132 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 ASPNQ9BXN1 380 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 NUAK2Q9H093 628 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 EGLN3Q9H6Z9 239 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 TRIM45Q9H8W5 580 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CPNE5Q9HCH3 593 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 EXOSC4Q9NPD3 245 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CHCHD3Q9NX63 227 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 PHF11Q9UIL8 331 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 ZNF229Q9UJW7 825 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 STUB1Q9UNE7 303 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 PNMA8CA0A1B0GUJ8 204 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 GSAPA4D1B5 854 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CPSF4LA6NMK7 179 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CCNYL3P0C7X3 344 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SMIM10L1P0DMW3 83 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 IGFBP4P22692 258 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CPN2P22792 545 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 IFNA8P32881 189 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 ACTR1BP42025 376 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms