RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 C1orf52Q8N6N3 182 aaKnown RBP17■□□□□ 0.31
GMDS-205ENST00000486793 SFXN2Q96NB2 322 aa17■□□□□ 0.31
GMDS-205ENST00000486793 HBEGFQ99075 208 aa17■□□□□ 0.31
GMDS-205ENST00000486793 LRRC1Q9BTT6 524 aa17■□□□□ 0.31
GMDS-205ENST00000486793 FAIM2Q9BWQ8 316 aa17■□□□□ 0.31
GMDS-205ENST00000486793 ACBD3Q9H3P7 528 aa17■□□□□ 0.31
GMDS-205ENST00000486793 ACSS3Q9H6R3 686 aa17■□□□□ 0.31
GMDS-205ENST00000486793 BRF2Q9HAW0 419 aa17■□□□□ 0.31
GMDS-205ENST00000486793 NINJ2Q9NZG7 142 aa17■□□□□ 0.31
GMDS-205ENST00000486793 HEY2Q9UBP5 337 aa17■□□□□ 0.31
GMDS-205ENST00000486793 UTS2RQ9UKP6 389 aa17■□□□□ 0.31
GMDS-205ENST00000486793 PACSIN3Q9UKS6 424 aa17■□□□□ 0.31
GMDS-205ENST00000486793 EIF3LQ9Y262 564 aaKnown RBP17■□□□□ 0.31
GMDS-205ENST00000486793 MED12Q93074 2177 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 ARHGAP21Q5T5U3 1957 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 A0A1W2PNV4 684 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 OTCP00480 354 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 RPS17P08708 135 aaKnown RBP16.99■□□□□ 0.31
GMDS-205ENST00000486793 TCEA1P23193 301 aaKnown RBP16.99■□□□□ 0.31
GMDS-205ENST00000486793 CASQ1P31415 396 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 MAGEA12P43365 314 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 CORO7P57737 925 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 TRA2BP62995 288 aaKnown RBP16.99■□□□□ 0.31
GMDS-205ENST00000486793 ZNF628Q5EBL2 1059 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 SCIMPQ6UWF3 145 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 GRAMD2AQ8IUY3 354 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 ZNF483Q8TF39 744 aaPredicted RBP16.99■□□□□ 0.31
GMDS-205ENST00000486793 STARD4Q96DR4 205 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 SLC35A4Q96G79 324 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 ZNF395Q9H8N7 513 aaPredicted RBP16.99■□□□□ 0.31
GMDS-205ENST00000486793 PFDN4Q9NQP4 134 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 NMRK1Q9NWW6 199 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 VPS29Q9UBQ0 182 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 ZNF225Q9UK10 706 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 SNX6Q9UNH7 406 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 DLGAP4Q9Y2H0 992 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 MRPS18CQ9Y3D5 142 aaKnown RBP16.99■□□□□ 0.31
GMDS-205ENST00000486793 WIF1Q9Y5W5 379 aa16.99■□□□□ 0.31
GMDS-205ENST00000486793 B4DXG7 233 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 ARHGEF9O43307 516 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 TSPAN2O60636 221 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 ABCB7O75027 752 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 ESRRBO95718 433 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 FREM3P0C091 2139 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 ZNF708P17019 499 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 DPP4P27487 766 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 CPOXP36551 454 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 BCL2A1Q16548 175 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 KAT2AQ92830 837 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 WFIKKN1Q96NZ8 548 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 BTBD9Q96Q07 612 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 MRPL57Q9BQC6 102 aaKnown RBP16.98■□□□□ 0.31
GMDS-205ENST00000486793 C6orf203Q9P0P8 240 aaPredicted RBP16.98■□□□□ 0.31
GMDS-205ENST00000486793 TESMINQ9Y4I5 508 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 JMJD1CQ15652 2540 aa16.98■□□□□ 0.31
GMDS-205ENST00000486793 C17orf51A8MQB3 221 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 MSTNO14793 375 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 CTIFO43310 598 aaKnown RBP16.97■□□□□ 0.31
GMDS-205ENST00000486793 BCAS2O75934 225 aaPredicted RBP16.97■□□□□ 0.31
GMDS-205ENST00000486793 SMNDC1O75940 238 aaKnown RBP eCLIP16.97■□□□□ 0.31
GMDS-205ENST00000486793 INHBAP08476 426 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 SBK3P0C264 359 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 COL6A2P12110 1019 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 GAS1P54826 345 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 B3GALT5-AS1P59052 145 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 EFR3AQ14156 821 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 TSNAXIP1Q2TAA8 658 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 TCHHL1Q5QJ38 904 aaPredicted RBP16.97■□□□□ 0.31
GMDS-205ENST00000486793 LARP4Q71RC2 724 aaKnown RBP eCLIP16.97■□□□□ 0.314e-7■□□□□ 8.1
GMDS-205ENST00000486793 P4HA3Q7Z4N8 544 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 TMEM151AQ8N4L1 468 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 OR9A2Q8NGT5 310 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 ZNF675Q8TD23 568 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 VSTM2LQ96N03 204 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 MRPL46Q9H2W6 279 aaKnown RBP16.97■□□□□ 0.31
GMDS-205ENST00000486793 KLHL28Q9NXS3 571 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 DKKL1Q9UK85 242 aa16.97■□□□□ 0.31
GMDS-205ENST00000486793 MANBAO00462 879 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 SIAH2O43255 324 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 HCRTR2O43614 444 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 OR4F21O95013 312 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 IL3P08700 152 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 CTAGE8P0CG41 777 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 CHN1P15882 459 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 GRK2P25098 689 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 KRT20P35900 424 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 HSD17B3P37058 310 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 NPSR1Q6W5P4 371 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 CHMP1BQ7LBR1 199 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 P3H2Q8IVL5 708 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 CTAGE4Q8IX94 777 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 CNEP1R1Q8N9A8 125 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 OR4N2Q8NGD1 307 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 RNF138Q8WVD3 245 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 EXOSC8Q96B26 276 aaKnown RBP16.96■□□□□ 0.31
GMDS-205ENST00000486793 ERP27Q96DN0 273 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 ARSGQ96EG1 525 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 C1QTNF3Q9BXJ4 246 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 TRPS1Q9UHF7 1281 aa16.96■□□□□ 0.31
GMDS-205ENST00000486793 SLC22A20A6NK97 555 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms