RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 DEKP35659 375 aaKnown RBP7.31□□□□□ -1.24
XRN1-212ENST00000486211 GP2P55259 537 aaKnown RBP7.31□□□□□ -1.24
XRN1-212ENST00000486211 CLDN20P56880 219 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 NRG3P56975 720 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 HMGCS1Q01581 520 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 KLF1Q13351 362 aaPredicted RBP7.31□□□□□ -1.24
XRN1-212ENST00000486211 SLBPQ14493 270 aaKnown RBP eCLIP7.31□□□□□ -1.24
XRN1-212ENST00000486211 P2RY6Q15077 328 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.31□□□□□ -1.24
XRN1-212ENST00000486211 FBLN7Q53RD9 439 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 ZNF470Q6ECI4 717 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 RINLQ6ZS11 566 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 USP43Q70EL4 1123 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 NUP54Q7Z3B4 507 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 GABRG1Q8N1C3 465 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 METTL25Q8N6Q8 603 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 ZNF615Q8N8J6 731 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 ACOT4Q8N9L9 421 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 C17orf47Q8NEP4 570 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 NUP43Q8NFH3 380 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 HSD17B8Q92506 261 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 RIT1Q92963 219 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 IQCDQ96DY2 449 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 HIST1H2AHQ96KK5 128 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 BTBD9Q96Q07 612 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 F2RL3Q96RI0 385 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 CHP1Q99653 195 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 HIST1H2AJQ99878 128 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 PIMREGQ9BSJ6 248 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 H2AFJQ9BTM1 129 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 NXF5Q9H1B4 397 aaKnown RBP7.31□□□□□ -1.24
XRN1-212ENST00000486211 METTL17Q9H7H0 456 aaPredicted RBP7.31□□□□□ -1.24
XRN1-212ENST00000486211 KLRF1Q9NZS2 232 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 SOX13Q9UN79 622 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 SLC22A14Q9Y267 594 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 EMC9Q9Y3B6 208 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 GOLGA8QA0A0J9YX86 632 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 TCRBV7S2A1N4TA0A589 114 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 CTAGE9A4FU28 777 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 GOLGA8OA6NCC3 632 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 WASHC1A8K0Z3 465 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 C17orf51A8MQB3 221 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 GOLGA8NF8WBI6 632 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 GOLGA8RI6L899 631 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 RTCAO00442 366 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 SEC14L5O43304 696 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 UGT2B11O75310 529 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 PRKRAO75569 313 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 C1GALT1C1LP0DN25 315 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 FCGR2AP12318 317 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 ETS1P14921 441 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 NAGAP17050 411 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 CPN2P22792 545 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 IL2RGP31785 369 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 LIMS1P48059 325 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 KCNC1P48547 511 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 NPY2RP49146 381 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 PDLIM4P50479 330 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 NEK2P51955 445 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 EEFSECP57772 596 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 KIF5AQ12840 1032 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 BIKQ13323 160 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 ZSWIM7Q19AV6 140 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 SFRP5Q5T4F7 317 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 PAQR3Q6TCH7 311 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 B3GLCTQ6Y288 498 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 PALM2Q8IXS6 379 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 MYO1HQ8N1T3 1032 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 MUC15Q8N387 334 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 ZNF418Q8TF45 676 aaPredicted RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 UTP4Q969X6 686 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 MRPL24Q96A35 216 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 LINGO1Q96FE5 620 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 GMPPAQ96IJ6 420 aaPredicted RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 FOXN4Q96NZ1 517 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 KCNC2Q96PR1 638 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 NDNQ99608 321 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 DNAJC7Q99615 494 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 PKP2Q99959 881 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 DHRS9Q9BPW9 319 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 BPIFA3Q9BQP9 254 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 PELOQ9BRX2 385 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 HDHD5Q9BXW7 423 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 CCDC68Q9H2F9 335 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 RPF2Q9H7B2 306 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 NT5DC2Q9H857 520 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 FANCFQ9NPI8 374 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 BFARQ9NZS9 450 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 TRMT6Q9UJA5 497 aaKnown RBP7.3□□□□□ -1.24
XRN1-212ENST00000486211 DKKL1Q9UK85 242 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 IKZF3Q9UKT9 509 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 ZNF337Q9Y3M9 751 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 COMMD10Q9Y6G5 202 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 KCNE2Q9Y6J6 123 aa7.3□□□□□ -1.24
XRN1-212ENST00000486211 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.3□□□□□ -1.24
XRN1-212ENST00000486211 ESYT3A0FGR9 886 aa7.29□□□□□ -1.24
XRN1-212ENST00000486211 SYCE3A1L190 88 aa7.29□□□□□ -1.24
XRN1-212ENST00000486211 LRP5LA4QPB2 252 aa7.29□□□□□ -1.24
XRN1-212ENST00000486211 EFCAB8A8MWE9 144 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms