RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 LSM11P83369 360 aaKnown RBP eCLIP10.52□□□□□ -0.73
NUP50-216ENST00000486184 GAB1Q13480 694 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 TUBA3CQ13748 450 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 NFYCQ13952 458 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 TLR1Q15399 786 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 OR1C1Q15619 314 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 DECR1Q16698 335 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 CDC73Q6P1J9 531 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 TUBA3EQ6PEY2 450 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 IGFL2Q6UWQ7 119 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 IGFL3Q6UXB1 125 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 WDR53Q7Z5U6 358 aaPredicted RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 DHDDSQ86SQ9 333 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 SNX32Q86XE0 403 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 PRR22Q8IZ63 422 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 CLEC4FQ8N1N0 589 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 COX18Q8N8Q8 333 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 ZNF441Q8N8Z8 693 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 EXD3Q8N9H8 876 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 TEX19Q8NA77 164 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 PCYOX1LQ8NBM8 494 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 FAM13CQ8NE31 585 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 RP9Q8TA86 221 aaKnown RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 GTF2H4Q92759 462 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 SPACA9Q96E40 222 aaPredicted RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 NEURL3Q96EH8 262 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 RAD21L1Q9H4I0 556 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 ZBTB20Q9HC78 741 aaPredicted RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 TIMMDC1Q9NPL8 285 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 SERHLQ9NQF3 203 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 CBLCQ9ULV8 474 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 NPFFR2Q9Y5X5 522 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 TRAV17A0A0B4J275 112 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 LOC100653049A0A140TA62 436 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 MRASO14807 208 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 TO15178 435 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 HS6ST1O60243 411 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 PPM1BO75688 479 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 KRT34O76011 436 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 OR6B1O95007 311 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 NADKO95544 446 aaPredicted RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 AGR2O95994 175 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 PDGFAP04085 211 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 FBXO45P0C2W1 286 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 ZCCHC18P0CG32 403 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 CT45A8P0DMV1 189 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 CT45A9P0DMV2 189 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 ACP2P11117 423 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 PPIBP23284 216 aaKnown RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 ABCD3P28288 659 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 CD96P40200 585 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 RPS26P62854 115 aaKnown RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 POU6F2P78424 691 aaPredicted RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 TXNL4AP83876 142 aaKnown RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 PSG6Q00889 435 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 ZNF169Q14929 603 aaPredicted RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 CYP27C1Q4G0S4 372 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 CT45A2Q5DJT8 189 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 ATAD3BQ5T9A4 648 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 SAXO2Q658L1 398 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 NPSR1Q6W5P4 371 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 RTL4Q6ZR62 310 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 TMEM178AQ8NBL3 297 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 LSM14AQ8ND56 463 aaKnown RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 OR5M3Q8NGP4 307 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 PNPT1Q8TCS8 783 aaKnown RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 TMBIM1Q969X1 311 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 CMTM5Q96DZ9 223 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 OMA1Q96E52 524 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 GIMAP5Q96F15 307 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 OTUB1Q96FW1 271 aaPredicted RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 RMND5BQ96G75 393 aaPredicted RBP10.51□□□□□ -0.73
NUP50-216ENST00000486184 C16orf58Q96GQ5 468 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 STACQ99469 402 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 CCDC106Q9BWC9 280 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 OR51I1Q9H343 314 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 IL1RL2Q9HB29 575 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 DUSP22Q9NRW4 184 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 EXD2Q9NVH0 621 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 GPATCH2Q9NW75 528 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 CORO2BQ9UQ03 480 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 PCDHB14Q9Y5E9 798 aa10.51□□□□□ -0.73
NUP50-216ENST00000486184 ASPDHA6ND91 283 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 TMEM247A6NEH6 219 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 EIF4E1BA6NMX2 242 aaKnown RBP10.5□□□□□ -0.73
NUP50-216ENST00000486184 EVPLLA8MZ36 301 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 K7EM74 188 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 SLC25A12O75746 678 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 NKX2-2O95096 273 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 P04436 131 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 COX4I1P13073 169 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 NAGAP17050 411 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 ATP6V1C1P21283 382 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 CRATP43155 626 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 TNFSF10P50591 281 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 CASP9P55211 416 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 HPCAP84074 193 aa10.5□□□□□ -0.73
NUP50-216ENST00000486184 KLRB1Q12918 225 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms