RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CTIFO43310 598 aaKnown RBP16.14■□□□□ 0.17
COL6A1-204ENST00000486023 PLOD3O60568 738 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 PEX11AO75192 247 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 BPGMP07738 259 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 CT45A8P0DMV1 189 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 CT45A9P0DMV2 189 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 GLI4P10075 376 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 TCEA1P23193 301 aaKnown RBP16.14■□□□□ 0.17
COL6A1-204ENST00000486023 KIR3DL1P43629 444 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 PRKAG1P54619 331 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 ZNF844Q08AG5 666 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 HSPB3Q12988 150 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 CT45A2Q5DJT8 189 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 C1orf185Q5T7R7 199 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 FNDC7Q5VTL7 733 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 TIGD3Q6B0B8 471 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 OR5M10Q6IEU7 315 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 SLC30A6Q6NXT4 461 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 NUDCD3Q8IVD9 361 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 ASB5Q8WWX0 329 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 CIDECQ96AQ7 238 aaPredicted RBP16.14■□□□□ 0.17
COL6A1-204ENST00000486023 PPCDCQ96CD2 204 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 VSTM2LQ96N03 204 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 AMDHD1Q96NU7 426 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 TTYH2Q9BSA4 534 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 SERHLQ9NQF3 203 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 QPCTLQ9NXS2 382 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 CAMK2AQ9UQM7 478 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 WBP11Q9Y2W2 641 aaKnown RBP16.14■□□□□ 0.17
COL6A1-204ENST00000486023 ZNF407Q9C0G0 2248 aa16.14■□□□□ 0.17
COL6A1-204ENST00000486023 COQ9O75208 318 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 SKAP2O75563 359 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-204ENST00000486023 NEFHP12036 1026 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 SDC1P18827 310 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 EFNA1P20827 205 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-204ENST00000486023 CHRNB4P30926 498 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 CDK9P50750 372 aaKnown RBP16.13■□□□□ 0.17
COL6A1-204ENST00000486023 CEBPEQ15744 281 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 CEP85LQ5SZL2 805 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 RTL6Q6ICC9 239 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 MREGQ8N565 214 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 ERP27Q96DN0 273 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 TMEM41AQ96HV5 264 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 BTBD9Q96Q07 612 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 STMN4Q9H169 189 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-204ENST00000486023 REEP4Q9H6H4 257 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 KCNK9Q9NPC2 374 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 KCNJ16Q9NPI9 418 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 EQTNQ9NQ60 294 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 ZDHHC2Q9UIJ5 367 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 FAM215AQ9Y5M1 114 aa16.13■□□□□ 0.17
COL6A1-204ENST00000486023 CACNA1DQ01668 2161 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 OR6C70A6NIJ9 312 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 UPK1AO00322 258 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 LSM1O15116 133 aaKnown RBP16.12■□□□□ 0.17
COL6A1-204ENST00000486023 TO15178 435 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 PDPK1O15530 556 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 TYROBPO43914 113 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 WDR1O75083 606 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 HPNP05981 417 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 FGF4P08620 206 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 PRPH2P23942 346 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 PTGDSP41222 190 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 UGT3A2Q3SY77 523 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 OR14L1PQ8NHC6 308 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 ELP4Q96EB1 424 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 METTL2AQ96IZ6 378 aaKnown RBP16.12■□□□□ 0.17
COL6A1-204ENST00000486023 PPP1R36Q96LQ0 422 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 TIMP4Q99727 224 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 PAIP2Q9BPZ3 127 aaKnown RBP16.12■□□□□ 0.17
COL6A1-204ENST00000486023 TMEM109Q9BVC6 243 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 TAS2R7Q9NYW3 318 aa16.12■□□□□ 0.17
COL6A1-204ENST00000486023 C19orf53Q9UNZ5 99 aaPredicted RBP16.12■□□□□ 0.17
COL6A1-204ENST00000486023 NINQ8N4C6 2090 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 TSPAN2O60636 221 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 LYPLA1O75608 230 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-204ENST00000486023 HSPA4LO95757 839 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 GABRA1P14867 456 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 ELAVL4P26378 380 aaKnown RBP16.11■□□□□ 0.17
COL6A1-204ENST00000486023 PTPN6P29350 595 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 ARRB2P32121 409 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 SERPINB4P48594 390 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 MANFP55145 182 aaKnown RBP16.11■□□□□ 0.17
COL6A1-204ENST00000486023 WNT3P56703 355 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 GAB1Q13480 694 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 EFR3AQ14156 821 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 ZNHIT3Q15649 155 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-204ENST00000486023 ZNF385BQ569K4 471 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 MEX3BQ6ZN04 569 aaKnown RBP16.11■□□□□ 0.17
COL6A1-204ENST00000486023 EXOC3L1Q86VI1 746 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 ULK2Q8IYT8 1036 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 FAM83FQ8NEG4 500 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-204ENST00000486023 LILRB4Q8NHJ6 448 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 ABTB1Q969K4 478 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-204ENST00000486023 C3orf30Q96M34 536 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 CCT7Q99832 543 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 C1orf50Q9BV19 199 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 UBQLN3Q9H347 655 aa16.11■□□□□ 0.17
COL6A1-204ENST00000486023 ZNF395Q9H8N7 513 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms