RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 FNDC5Q8NAU1 212 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ZFP62Q8NB50 900 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ZFP28Q8NHY6 868 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 AGR3Q8TD06 166 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 EXOSC8Q96B26 276 aaKnown RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 PPCDCQ96CD2 204 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 TUBGCP3Q96CW5 907 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 HSPBAP1Q96EW2 488 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ZBED6CLQ96FA7 236 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 BRINP2Q9C0B6 783 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 MEAF6Q9HAF1 191 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 SLC24A3Q9HC58 644 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 DEPPQ9NTK1 212 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ACSS1Q9NUB1 689 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ATAD3AQ9NVI7 634 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ALKBH4Q9NXW9 302 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 TAS2R9Q9NYW1 312 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 NOP53Q9NZM5 478 aaKnown RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 HCFC1P51610 2035 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 PRRC2AP48634 2157 aaKnown RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 CELSR1Q9NYQ6 3014 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 MYOCOSA0A1B0GUC4 107 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 FAM221AA4D161 298 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ANKRD33BA6NCL7 494 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ACOT7O00154 380 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 HRKO00198 91 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 WWP2O00308 870 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 TP53I11O14683 189 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 TO15178 435 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 HDAC3O15379 428 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 PEX11AO75192 247 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 SKAP2O75563 359 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 CTAG2O75638 210 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 SOX30O94993 753 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 CT62P0C5K7 136 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 BCKDHAP12694 445 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 DRD5P21918 477 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 GPX3P22352 226 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 TACR1P25103 407 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ACVR2AP27037 513 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 SSTR4P31391 388 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 FRKP42685 505 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 PPICP45877 212 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ZFP36L2P47974 494 aaKnown RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 FOXD4Q12950 439 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF791Q3KP31 576 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 OGFOD2Q6N063 350 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 TMEM81Q6P7N7 255 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 IL20RBQ6UXL0 311 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 WDR53Q7Z5U6 358 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 CCDC116Q8IYX3 515 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 PSD4Q8NDX1 1056 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 PAQR8Q8TEZ7 354 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 NINJ1Q92982 152 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ADIPOR1Q96A54 375 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ARL8AQ96BM9 186 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 SPACA9Q96E40 222 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 LCORQ96JN0 433 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 C3orf30Q96M34 536 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 AMDHD1Q96NU7 426 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 GAL3ST4Q96RP7 486 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 GPATCH1Q9BRR8 931 aaKnown RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 TTYH2Q9BSA4 534 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 C20orf27Q9GZN8 174 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 CXXC4Q9H2H0 198 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 SACM1LQ9NTJ5 587 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 CNIH4Q9P003 139 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ATP6V1HQ9UI12 483 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 ST6GALNAC2Q9UJ37 374 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 EXO1Q9UQ84 846 aaKnown RBP9.18□□□□□ -0.94
CPSF4-213ENST00000484112 PLEKHA6Q9Y2H5 1048 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 PTGDR2Q9Y5Y4 395 aa9.18□□□□□ -0.94
CPSF4-213ENST00000484112 INTS1Q8N201 2190 aaKnown RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 A0A0G2JNJ9 132 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 ATP6AP2A0A1C7CYW4 349 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 A0A1W2PS29 197 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 FRG2CA6NGY1 282 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 SCAMP2O15127 329 aaKnown RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 PDPK1O15530 556 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 ABCB7O75027 752 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 ATP6AP2O75787 350 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 OR6B1O95007 311 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 CBX7O95931 251 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 P04436 131 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 GLI4P10075 376 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 LBPP18428 481 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 CNR1P21554 472 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 DNASE1P24855 282 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 SOX3P41225 446 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 EMDP50402 254 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 NCBP2P52298 156 aaKnown RBP eCLIP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 DGKQP52824 942 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 DLX5P56178 289 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 CLDN8P56748 225 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 OCRLQ01968 901 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 RPS6KA2Q15349 733 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 NTRK2Q16620 822 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 DPY19L1Q2PZI1 675 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF750Q32MQ0 723 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms