RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
COL9A2-207ENST00000482722 UBQLN2Q9UHD9 624 aa13.48□□□□□ -0.25
COL9A2-207ENST00000482722 PHF11Q9UIL8 331 aa13.48□□□□□ -0.25
COL9A2-207ENST00000482722 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
COL9A2-207ENST00000482722 MOSPD3O75425 235 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 SOD1P00441 154 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 IFNA14P01570 189 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 CATP04040 527 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 RHOP08100 348 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ANXA3P12429 323 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 IMPA1P29218 277 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 PCBP3P57721 371 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 C1orf53Q5VUE5 145 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 TRIM40Q6P9F5 258 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 LIPIQ6XZB0 460 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ADGRG3Q86Y34 549 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 SFTPA1Q8IWL2 248 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 RASGEF1AQ8N9B8 481 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 IL17RCQ8NAC3 791 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 OR2A12Q8NGT7 310 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 RBPMSQ93062 196 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 PRR14Q9BWN1 585 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 CLEC4MQ9H2X3 399 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 TMEM38AQ9H6F2 299 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 IL23AQ9NPF7 189 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 KLHL42Q9P2K6 505 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 SH2B3Q9UQQ2 575 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 MTRF1O75570 445 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 TFPIP10646 304 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ELK1P19419 428 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ELAVL4P26378 380 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 PTBP1P26599 531 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 FGF9P31371 208 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 GABRA5P31644 462 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 TAS2R50P59544 299 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ZMYND11Q15326 602 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 GRHL2Q6ISB3 625 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 CAMKMTQ7Z624 323 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 METTL3Q86U44 580 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ADGRF3Q8IZF5 1079 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 BMPERQ8N8U9 685 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 MRPL43Q8N983 215 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 PPCDCQ96CD2 204 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ZNF582Q96NG8 517 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ABCG5Q9H222 651 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 REEP4Q9H6H4 257 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 NUDT15Q9NV35 164 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 ZSCAN32Q9NX65 697 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 EXTL2Q9UBQ6 330 aa13.47□□□□□ -0.25
COL9A2-207ENST00000482722 HELZP42694 1942 aaKnown RBP13.47□□□□□ -0.25
COL9A2-207ENST00000482722 PCP4L1A6NKN8 68 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TOR1AO14656 332 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 KIAA0355O15063 1070 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 SLC16A5O15375 505 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 PPM1BO75688 479 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 DHFRP00374 187 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 BCHEP06276 602 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 VIPR2P41587 438 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 GAS1P54826 345 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 COL9A2Q14055 689 aaPredicted RBP13.46□□□□□ -0.25
COL9A2-207ENST00000482722 DCST1Q5T197 706 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TMEM91Q6ZNR0 172 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 OLIG3Q7RTU3 272 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 COMMD6Q7Z4G1 85 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 OXR1Q8N573 874 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 SCMH1Q96GD3 660 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 KLHL15Q96M94 604 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 NRTNQ99748 197 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TMED9Q9BVK6 235 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 RNF32Q9H0A6 362 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 ZC4H2Q9NQZ6 224 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 RDH8Q9NYR8 311 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 MGAT4BQ9UQ53 548 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 NUMA1Q14980 2115 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 C7orf66A4D0T2 115 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 SH3BP5O60239 455 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 LALBAP00709 142 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TYRP14679 529 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 BMP8BP34820 402 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 BTCP35070 178 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 PPM1AP35813 382 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 METAP1P53582 386 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 ZNF630Q2M218 657 aaPredicted RBP13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TCEAL5Q5H9L2 206 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 C3orf38Q5JPI3 329 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TMEM240Q5SV17 173 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 MPP7Q5T2T1 576 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 PGBD2Q6P3X8 592 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TMEM220Q6QAJ8 160 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 RTL4Q6ZR62 310 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 BMP8AQ7Z5Y6 402 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 LUZP2Q86TE4 346 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 MARCH9Q86YJ5 346 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 CPXM2Q8N436 756 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 FAM26EQ8N5C1 309 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 TBC1D17Q9HA65 648 aa13.46□□□□□ -0.25
COL9A2-207ENST00000482722 KCMF1Q9P0J7 381 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms