RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 OR5M3Q8NGP4 307 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 CPT1CQ8TCG5 803 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 PAQR8Q8TEZ7 354 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 HOXB13Q92826 284 aaPredicted RBP23.03■■□□□ 1.28
PERM1-203ENST00000479361 TMBIM1Q969X1 311 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 SNRNP40Q96DI7 357 aaKnown RBP23.03■■□□□ 1.28
PERM1-203ENST00000479361 PANX1Q96RD7 426 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 SECISBP2Q96T21 854 aaKnown RBP23.03■■□□□ 1.28
PERM1-203ENST00000479361 AGPAT4Q9NRZ5 378 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 CCDC167Q9P0B6 97 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 MAP10Q9P2G4 905 aa23.03■■□□□ 1.28
PERM1-203ENST00000479361 MRTO4Q9UKD2 239 aaKnown RBP23.03■■□□□ 1.28
PERM1-203ENST00000479361 FAF1Q9UNN5 650 aaPredicted RBP23.03■■□□□ 1.28
PERM1-203ENST00000479361 RNF103-CHMP3A0A140T963 221 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 SOX30O94993 753 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 HMGN2P05204 90 aaKnown RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 UQCRC2P22695 453 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 LSP1P33241 339 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 GABRA3P34903 492 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 ZFP36L2P47974 494 aaKnown RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 GYS2P54840 703 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 FBXW4P57775 412 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 MRPS22P82650 360 aaKnown RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 RCAN2Q14206 197 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 LASP1Q14847 261 aaKnown RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 TIGD2Q4W5G0 525 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 NUP54Q7Z3B4 507 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 WDR53Q7Z5U6 358 aaPredicted RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 ZNF605Q86T29 641 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 OR5AK3PQ8NH89 298 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 GOT1L1Q8NHS2 421 aaPredicted RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 SLC9A6Q92581 669 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 JADE3Q92613 823 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 TRIM4Q9C037 500 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 NSRP1Q9H0G5 558 aaKnown RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 SH2D2AQ9NP31 389 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 CBLCQ9ULV8 474 aa23.02■■□□□ 1.28
PERM1-203ENST00000479361 CHCHD2Q9Y6H1 151 aaPredicted RBP23.02■■□□□ 1.28
PERM1-203ENST00000479361 OR6C70A6NIJ9 312 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 PEX1O43933 1283 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 REM1O75628 298 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 CRYABP02511 175 aaKnown RBP23.01■■□□□ 1.27
PERM1-203ENST00000479361 ALOX5P09917 674 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 CCL3P10147 92 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 CNR1P21554 472 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 IL12BP29460 328 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 MAP3K8P41279 467 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 GAB1Q13480 694 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 DECR1Q16698 335 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 AGKQ53H12 422 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 BLOC1S3Q6QNY0 202 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 SULF2Q8IWU5 870 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 FBXW8Q8N3Y1 598 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 BCORP1Q8N888 145 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 DNAJB8Q8NHS0 232 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 GPR151Q8TDV0 419 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 ITCHQ96J02 903 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 COL21A1Q96P44 957 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 ACTRT3Q9BYD9 372 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 VPS4AQ9UN37 437 aa23.01■■□□□ 1.27
PERM1-203ENST00000479361 CCDC154A6NI56 674 aa23■■□□□ 1.27
PERM1-203ENST00000479361 RFXANKO14593 260 aa23■■□□□ 1.27
PERM1-203ENST00000479361 NKX2-2O95096 273 aa23■■□□□ 1.27
PERM1-203ENST00000479361 KCNH1O95259 989 aa23■■□□□ 1.27
PERM1-203ENST00000479361 PSMD4P55036 377 aaKnown RBP23■■□□□ 1.27
PERM1-203ENST00000479361 GNGT1P63211 74 aa23■■□□□ 1.27
PERM1-203ENST00000479361 TLE1Q04724 770 aa23■■□□□ 1.27
PERM1-203ENST00000479361 SF3A3Q12874 501 aaKnown RBP eCLIP23■■□□□ 1.27
PERM1-203ENST00000479361 EFR3AQ14156 821 aa23■■□□□ 1.27
PERM1-203ENST00000479361 TBCELQ5QJ74 424 aa23■■□□□ 1.27
PERM1-203ENST00000479361 CDC73Q6P1J9 531 aa23■■□□□ 1.27
PERM1-203ENST00000479361 PNPLA5Q7Z6Z6 429 aaPredicted RBP23■■□□□ 1.27
PERM1-203ENST00000479361 POGLUT1Q8NBL1 392 aa23■■□□□ 1.27
PERM1-203ENST00000479361 SLC16A11Q8NCK7 471 aa23■■□□□ 1.27
PERM1-203ENST00000479361 OR4N2Q8NGD1 307 aa23■■□□□ 1.27
PERM1-203ENST00000479361 SPPL2AQ8TCT8 520 aa23■■□□□ 1.27
PERM1-203ENST00000479361 GRHL3Q8TE85 626 aa23■■□□□ 1.27
PERM1-203ENST00000479361 VPS33AQ96AX1 596 aa23■■□□□ 1.27
PERM1-203ENST00000479361 SLC35A4Q96G79 324 aa23■■□□□ 1.27
PERM1-203ENST00000479361 C16orf58Q96GQ5 468 aa23■■□□□ 1.27
PERM1-203ENST00000479361 STACQ99469 402 aa23■■□□□ 1.27
PERM1-203ENST00000479361 FAM173AQ9BQD7 235 aa23■■□□□ 1.27
PERM1-203ENST00000479361 ZNF385DQ9H6B1 395 aa23■■□□□ 1.27
PERM1-203ENST00000479361 DUSP22Q9NRW4 184 aa23■■□□□ 1.27
PERM1-203ENST00000479361 GPATCH2Q9NW75 528 aa23■■□□□ 1.27
PERM1-203ENST00000479361 GIN1Q9NXP7 522 aa23■■□□□ 1.27
PERM1-203ENST00000479361 GMNCA6NCL1 334 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 ASPDHA6ND91 283 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 NR5A2O00482 541 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 ACP2P11117 423 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 CHI3L1P36222 383 aaPredicted RBP22.99■■□□□ 1.27
PERM1-203ENST00000479361 PIGAP37287 484 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 MEOX1P50221 254 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 SEC24CP53992 1094 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 PNLIPRP2P54317 469 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 GPR85P60893 370 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 PRR30Q53SZ7 412 aaPredicted RBP22.99■■□□□ 1.27
PERM1-203ENST00000479361 GK5Q6ZS86 529 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 C6orf120Q7Z4R8 191 aa22.99■■□□□ 1.27
PERM1-203ENST00000479361 FUNDC1Q8IVP5 155 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms