RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ALKAL1Q6UXT8 129 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 C12orf40Q86WS4 652 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 NAXDQ8IW45 347 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 CAMKVQ8NCB2 501 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 PEX11GQ96HA9 241 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 TSNAXQ99598 290 aaKnown RBP20.03■□□□□ 0.8
SDF4-206ENST00000478938 SYT17Q9BSW7 474 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 ABCG4Q9H172 646 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 POLR2J3Q9H1A7 115 aaKnown RBP20.03■□□□□ 0.8
SDF4-206ENST00000478938 OR10A4Q9H209 315 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 C11orf49Q9H6J7 331 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 GPATCH2Q9NW75 528 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 ADAMTS5Q9UNA0 930 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 RASD1Q9Y272 281 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 DHRS7Q9Y394 339 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 TRBC2A0A5B9 178 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 SNTB1Q13884 538 aaKnown RBP20.03■□□□□ 0.8
SDF4-206ENST00000478938 GUCA2BQ16661 112 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 HES5Q5TA89 166 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 OR10K1Q8NGX5 313 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 SCAMP5Q8TAC9 235 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 PDCD10Q9BUL8 212 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 WDR26Q9H7D7 661 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 NPDC1Q9NQX5 325 aaPredicted RBP20.03■□□□□ 0.8
SDF4-206ENST00000478938 SDHAF3Q9NRP4 125 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 NFKBIL1Q9UBC1 381 aaPredicted RBP20.03■□□□□ 0.8
SDF4-206ENST00000478938 LRFN2Q9ULH4 789 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 OARD1Q9Y530 152 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 IGHV2-70P01814 119 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 SRPRAP08240 638 aaKnown RBP20.02■□□□□ 0.8
SDF4-206ENST00000478938 PNPLA4P41247 253 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 CAPZA1P52907 286 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 LIM2P55344 173 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 OR10A3P58181 314 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 ARHGEF7Q14155 803 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 UBXN2BQ14CS0 331 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 LRRN1Q6UXK5 716 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 OR51Q1Q8NH59 317 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 OR14A16Q8NHC5 309 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 WNT2BQ93097 391 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 POLR1EQ9GZS1 481 aaKnown RBP20.02■□□□□ 0.8
SDF4-206ENST00000478938 OR51M1Q9H341 326 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 ANKRD19PQ9H560 264 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 FXYD6-FXYD2A0A087WZ82 144 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 SLC28A2O43868 658 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 THP07101 528 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 RD3LP0DJH9 198 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 NPR2P20594 1047 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 FNTBP49356 437 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 BACE1P56817 501 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 SNTB2Q13425 540 aaKnown RBP20.02■□□□□ 0.8
SDF4-206ENST00000478938 EIF4EBP2Q13542 120 aaPredicted RBP20.02■□□□□ 0.8
SDF4-206ENST00000478938 SLITRK4Q8IW52 837 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 UMODL1-AS1Q8N2C9 162 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 OXR1Q8N573 874 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 FAM26EQ8N5C1 309 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 TOP6BLQ8N6T0 577 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 OR11G2Q8NGC1 345 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 THAP4Q8WY91 577 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 DUSP26Q9BV47 211 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 FXYD6Q9H0Q3 95 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 MTG2Q9H4K7 406 aa20.02■□□□□ 0.8
SDF4-206ENST00000478938 ARRDC5A6NEK1 342 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 AKR7A3O95154 331 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 THBS2P35442 1172 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 HBMQ6B0K9 141 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 CXorf57Q6NSI4 855 aaKnown RBP20.01■□□□□ 0.79
SDF4-206ENST00000478938 USP53Q70EK8 1073 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 SERPINA12Q8IW75 414 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 LKAAEAR1Q8TD35 194 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 HMGB4Q8WW32 186 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 CHFRQ96EP1 664 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 TMEM121BQ9BXQ6 578 aaPredicted RBP20.01■□□□□ 0.79
SDF4-206ENST00000478938 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 TMEM161AQ9NX61 479 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 ZNF69Q9UC07 566 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 PLEKHM1Q9Y4G2 1056 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 GIPP09681 153 aaPredicted RBP20.01■□□□□ 0.79
SDF4-206ENST00000478938 RORAP35398 523 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 RAD52P43351 418 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 ZNF791Q3KP31 576 aaPredicted RBP20.01■□□□□ 0.79
SDF4-206ENST00000478938 NCEH1Q6PIU2 408 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 OR8J2Q8NGG1 315 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 PHOSPHO1Q8TCT1 267 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 ISYNA1Q9NPH2 558 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 PIM2Q9P1W9 311 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 GPR52Q9Y2T5 361 aa20.01■□□□□ 0.79
SDF4-206ENST00000478938 TMEM200CA6NKL6 621 aa20■□□□□ 0.79
SDF4-206ENST00000478938 PRKAR1BP31321 381 aa20■□□□□ 0.79
SDF4-206ENST00000478938 PSMA6P60900 246 aaKnown RBP20■□□□□ 0.79
SDF4-206ENST00000478938 PRAMEF13Q5VWM6 474 aa20■□□□□ 0.79
SDF4-206ENST00000478938 DEFB132Q7Z7B7 95 aa20■□□□□ 0.79
SDF4-206ENST00000478938 CIR1Q86X95 450 aaPredicted RBP20■□□□□ 0.79
SDF4-206ENST00000478938 LINC01465Q8N7H1 131 aa20■□□□□ 0.79
SDF4-206ENST00000478938 ZNF485Q8NCK3 441 aa20■□□□□ 0.79
SDF4-206ENST00000478938 SLC25A28Q96A46 364 aa20■□□□□ 0.79
SDF4-206ENST00000478938 CBLCQ9ULV8 474 aa20■□□□□ 0.79
SDF4-206ENST00000478938 PRAMEF2O60811 474 aa20■□□□□ 0.79
SDF4-206ENST00000478938 TRBC1P01850 177 aa20■□□□□ 0.79
SDF4-206ENST00000478938 EDNRBP24530 442 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms