RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 MBPP02686 304 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 UMODP07911 640 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SERPINA6P08185 405 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SLC35G6P0C7Q6 338 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 C1GALT1C1LP0DN25 315 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 NCF1P14598 390 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 DLSTP36957 453 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PRKAA2P54646 552 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 NANOS3P60323 173 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 HERVK_113P63132 956 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 DCDP81605 110 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 CDC20Q12834 499 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 DOC2AQ14183 400 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 COL28A1Q2UY09 1125 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 AWAT1Q58HT5 328 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 FBXO48Q5FWF7 155 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 BEND6Q5SZJ8 279 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 FAM90A2PQ658T7 463 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ADNP2Q6IQ32 1131 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 KLC3Q6P597 504 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 FAM199XQ6PEV8 388 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 TMIGD1Q6UXZ0 262 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZNF788Q6ZQV5 615 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 MTERF4Q7Z6M4 381 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 PRIMA1Q86XR5 153 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 MYLK4Q86YV6 388 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 PTGR2Q8N8N7 351 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 BANPQ8N9N5 519 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TTC29Q8NA56 475 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 ATG16L2Q8NAA4 619 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CAMKVQ8NCB2 501 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TTLQ8NG68 377 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 OR1N1Q8NGS0 311 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 OR2Y1Q8NGV0 311 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 OR6Y1Q8NGX8 325 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 WDR20Q8TBZ3 569 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 RDH11Q8TC12 318 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ESAMQ96AP7 390 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 KIAA1143Q96AT1 154 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 MOCOSQ96EN8 888 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 WBP1Q96G27 269 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 NAF1Q96HR8 494 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 TSNARE1Q96NA8 513 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TMEM237Q96Q45 408 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 AIF1LQ9BQI0 150 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CCDC77Q9BR77 488 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 NTMT1Q9BV86 223 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ERVK-6Q9BXR3 956 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CAPS2Q9BXY5 557 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZNF717Q9BY31 904 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 DRC3Q9H069 523 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ACTL8Q9H568 366 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 GPN2Q9H9Y4 310 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 CD274Q9NZQ7 290 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 OPTCQ9UBM4 332 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CTSFQ9UBX1 484 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZNF225Q9UK10 706 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 NXT1Q9UKK6 140 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZNF490Q9ULM2 529 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 HELZ2Q9BYK8 2649 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 CNTRLQ7Z7A1 2325 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 RELNP78509 3460 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 LRIT2A6NDA9 550 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 FOXO6A8MYZ6 492 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 GALR3O60755 368 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 CREG1O75629 220 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CEACAM4O75871 244 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 KLK3P07288 261 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 CD63P08962 238 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TMIGD3P0DMS9 266 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 GFAPP14136 432 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 H2AFXP16104 143 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 TCN2P20062 427 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SERPINB1P30740 379 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 HNRNPH1P31943 449 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 HNF4AP41235 474 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SLCO1A2P46721 670 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ARFIP1P53367 373 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 DNAJB13P59910 316 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CFHR3Q02985 330 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CHIT1Q13231 466 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TSTA3Q13630 321 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 GTF2H2Q13888 395 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 HERC3Q15034 1050 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 LINC00303Q3SY05 128 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PAGE2BQ5JRK9 111 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZNF678Q5SXM1 525 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 LIPJQ5W064 366 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 NIPAL1Q6NVV3 410 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 GTF2H2CQ6P1K8 395 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 LRIG3Q6UXM1 1119 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZYG11AQ6WRX3 759 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PRSS41Q7RTY9 318 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 GOLGA7Q7Z5G4 137 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 APLFQ8IW19 511 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 ENDOVQ8N8Q3 282 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 LSM14AQ8ND56 463 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 TRPV3Q8NET8 790 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 OR52B6Q8NGF0 335 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 UTP15Q8TED0 518 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms