RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	DYRK1A	Q13627	763 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	GK2	Q14410	553 aa	Predicted RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	SMCO1	Q147U7	214 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PAFAH1B3	Q15102	231 aa	Known RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	SPHAR	Q15513	63 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM187B	Q17R55	369 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	LY6K	Q17RY6	165 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	RNF151	Q2KHN1	245 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	FLYWCH1	Q4VC44	716 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PYCR3	Q53H96	274 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM69A	Q5T7M9	428 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	AADACL4	Q5VUY2	407 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	KCTD11	Q693B1	232 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	HIST2H2AA3	Q6FI13	130 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	VHLL	Q6RSH7	139 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	DLEU7	Q6UYE1	221 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	WASH2P	Q6VEQ5	465 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF730	Q6ZMV8	503 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PID1	Q7Z2X4	250 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM122B	Q7Z309	247 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	COMTD1	Q86VU5	262 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	CYP4Z1	Q86W10	505 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	KIAA0319L	Q8IZA0	1049 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	NAGS	Q8N159	534 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF561	Q8N587	486 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	EID2	Q8N6I1	236 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	RTL3	Q8N8U3	475 aa	Known RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	C11orf65	Q8NCR3	313 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPR156	Q8NFN8	814 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	IPMK	Q8NFU5	416 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR9I1	Q8NGQ6	314 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR6P1	Q8NGX9	317 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	JOSD2	Q8TAC2	188 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	NANP	Q8TBE9	248 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PHOSPHO1	Q8TCT1	267 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	RXFP2	Q8WXD0	754 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	ST8SIA2	Q92186	375 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	DNASE1L2	Q92874	299 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	FATE1	Q969F0	183 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	UPRT	Q96BW1	309 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	LRRC46	Q96FV0	321 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	HIST1H2AH	Q96KK5	128 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF354B	Q96LW1	612 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	TBATA	Q96M53	351 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	SFXN2	Q96NB2	322 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF599	Q96NL3	588 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	MTERF1	Q99551	399 aa	Known RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	HIST1H2AJ	Q99878	128 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	RTP3	Q9BQQ7	232 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PI4K2A	Q9BTU6	479 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	IFT27	Q9BW83	186 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	MAGEB5	Q9BZ81	275 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC29A3	Q9BZD2	475 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRRG3	Q9BZD7	231 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	OSBPL2	Q9H1P3	480 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	NXF3	Q9H4D5	531 aa	Known RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	SMOC1	Q9H4F8	434 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	TFB2M	Q9H5Q4	396 aa	Known RBP	4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	RNF122	Q9H9V4	155 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	ABCB9	Q9NP78	766 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	CISH	Q9NSE2	258 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	C1orf109	Q9NX04	203 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	MIOS	Q9NXC5	875 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	CLDND1	Q9NY35	253 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	ASIC5	Q9NY37	505 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	GDE1	Q9NZC3	331 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	MIOX	Q9UGB7	285 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PCDHGA6	Q9Y5G7	932 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	PCDHA10	Q9Y5I2	948 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	TRPV2	Q9Y5S1	764 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	DNAJC15	Q9Y5T4	150 aa		4.44	□□□□□ -1.7
PTCD3-212	ENST00000477520	LRRC37A2	A6NM11	1700 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	DOCK5	Q9H7D0	1870 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	WDR81	Q562E7	1941 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TEX13C	A0A0J9YWL9	993 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520		A0A0U1RQS6	177 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	GSAP	A4D1B5	854 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ANKRD61	A6NGH8	418 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	C5orf52	A6NGY3	159 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	EFCAB7	A8K855	629 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SNRPGP15	A8MWD9	76 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMEM233	B4DJY2	109 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF879	B4DU55	563 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	NEDD8-MDP1	E9PL57	170 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520		H7C0S8	307 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	DDX39A	O00148	427 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ARVCF	O00192	962 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPR171	O14626	319 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CASK	O14936	926 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PIP5K1B	O14986	540 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PER2	O15055	1255 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SCAMP1	O15126	338 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	NUPL2	O15504	423 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	RDH16	O75452	317 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	REM1	O75628	298 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	EIF3G	O75821	320 aa	Known RBP eCLIP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ANXA9	O76027	345 aa		4.43	□□□□□ -1.7

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