RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 FNDC8Q8TC99 324 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 U2AF1L4Q8WU68 220 aaKnown RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 CCDC51Q96ER9 411 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 C11orf24Q96F05 449 aaPredicted RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 OR5M11Q96RB7 305 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 CCT8L2Q96SF2 557 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 SPXQ9BT56 116 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 NDUFAF3Q9BU61 184 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 CARD6Q9BX69 1037 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 DEFB126Q9BYW3 111 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 SLITRK2Q9H156 845 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 TMEM231Q9H6L2 316 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 FAM114A2Q9NRY5 505 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF275Q9NSD4 429 aaPredicted RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 B4GALT7Q9UBV7 327 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 IL20RAQ9UHF4 553 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 CCPG1Q9ULG6 757 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF490Q9ULM2 529 aaPredicted RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 NUDCQ9Y266 331 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF318Q5VUA4 2279 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 IGHV3-35A0A0C4DH35 117 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 KLF18A0A0U1RQI7 1052 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 G3V3Y1 287 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 DUSP14O95147 198 aaKnown RBP2.46□□□□□ -2.02
TARDBP-208ENST00000477447 MT-ATP6P00846 226 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 CT45A10P0DMU9 189 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 RALAP11233 206 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 IGFBP5P24593 272 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 IL2RGP31785 369 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 METAP1P53582 386 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 SLC26A5P58743 744 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 PDK1Q15118 436 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 PARP6Q2NL67 630 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 BEND6Q5SZJ8 279 aaPredicted RBP2.46□□□□□ -2.02
TARDBP-208ENST00000477447 FAM159AQ6UWV7 190 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 C2orf66Q6UXQ4 117 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 TMEM26Q6ZUK4 368 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 SH2D6Q7Z4S9 175 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 MCOLN2Q8IZK6 566 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 KDM8Q8N371 416 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 C11orf42Q8N5U0 333 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 ARFGAP2Q8N6H7 521 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 ZNF525Q8N782 197 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 CCDC47Q96A33 483 aaKnown RBP2.46□□□□□ -2.02
TARDBP-208ENST00000477447 DNAJA3Q96EY1 480 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 CNOT6LQ96LI5 555 aaKnown RBP2.46□□□□□ -2.02
TARDBP-208ENST00000477447 MIEF1Q9NQG6 463 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 DCAF13Q9NV06 445 aaKnown RBP2.46□□□□□ -2.02
TARDBP-208ENST00000477447 GDAP2Q9NXN4 497 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.46□□□□□ -2.02
TARDBP-208ENST00000477447 MBD2Q9UBB5 411 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 SPASTQ9UBP0 616 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 Q9UF83 564 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 DHRS7Q9Y394 339 aa2.46□□□□□ -2.02
TARDBP-208ENST00000477447 IGKV6D-41A0A0C4DH26 115 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 TRBV7-9A0A0J9YWB2 115 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 NPIPA2E9PIF3 369 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 SLC2A10O95528 541 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 SLC35G4P0C7Q5 338 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 ACVR1BP36896 505 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 OR1D4P47884 311 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 STK19P49842 368 aaPredicted RBP2.45□□□□□ -2.02
TARDBP-208ENST00000477447 HERVK_113P63132 956 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 ERVK-8P63133 956 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 IGLV3-21P80748 117 aaPredicted RBP2.45□□□□□ -2.02
TARDBP-208ENST00000477447 IL9RQ01113 521 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 ZP4Q12836 540 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 SNX1Q13596 522 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 SERTAD2Q14140 314 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 RAB35Q15286 201 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 ZSWIM7Q19AV6 140 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 LRIT3Q3SXY7 679 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 LDLRAP1Q5SW96 308 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 LGSNQ5TDP6 509 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 OLFML2AQ68BL7 652 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 DMKNQ6E0U4 476 aaPredicted RBP2.45□□□□□ -2.02
TARDBP-208ENST00000477447 NEK5Q6P3R8 708 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 PLBD1Q6P4A8 553 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 OLFM4Q6UX06 510 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 PARGQ86W56 976 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 CCDC36Q8IYA8 594 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 ARL10Q8N8L6 244 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 DQX1Q8TE96 717 aaKnown RBP2.45□□□□□ -2.02
TARDBP-208ENST00000477447 TFB1MQ8WVM0 346 aaKnown RBP2.45□□□□□ -2.02
TARDBP-208ENST00000477447 TMEM186Q96B77 213 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 TADA1Q96BN2 335 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 CASD1Q96PB1 797 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 TMEM237Q96Q45 408 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 PAXXQ9BUH6 204 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 HCAR1Q9BXC0 346 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 ERVK-6Q9BXR3 956 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 IKZF5Q9H5V7 419 aa2.45□□□□□ -2.02
TARDBP-208ENST00000477447 DUS2Q9NX74 493 aaKnown RBP2.45□□□□□ -2.02
TARDBP-208ENST00000477447 BARX2Q9UMQ3 279 aaPredicted RBP2.45□□□□□ -2.02
TARDBP-208ENST00000477447 FRG2CA6NGY1 282 aa2.44□□□□□ -2.02
TARDBP-208ENST00000477447 KLLNB2CW77 178 aa2.44□□□□□ -2.02
TARDBP-208ENST00000477447 IMPA2O14732 288 aa2.44□□□□□ -2.02
TARDBP-208ENST00000477447 TNFSF11O14788 317 aa2.44□□□□□ -2.02
TARDBP-208ENST00000477447 HAT1O14929 419 aa2.44□□□□□ -2.02
TARDBP-208ENST00000477447 SSX5O60225 188 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms