RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CTBP2P56545 445 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 EEFSECP57772 596 aaKnown RBP13.66□□□□□ -0.22
SMG5-204ENST00000476954 ACTG1P63261 375 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 SARNPP82979 210 aaKnown RBP13.66□□□□□ -0.22
SMG5-204ENST00000476954 EXOSC7Q15024 291 aaKnown RBP13.66□□□□□ -0.22
SMG5-204ENST00000476954 RAET1LQ5VY80 246 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 FIGNL1Q6PIW4 674 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 FAM111BQ6SJ93 734 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 BEND4Q6ZU67 534 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 PIWIL2Q8TC59 973 aaKnown RBP13.66□□□□□ -0.22
SMG5-204ENST00000476954 ANKRD7Q92527 254 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 PROX1Q92786 737 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 OR10A4Q9H209 315 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 VWA7Q9Y334 891 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 ASB4Q9Y574 426 aa13.66□□□□□ -0.22
SMG5-204ENST00000476954 PLPP1O14494 284 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 SS18L1O75177 396 aaPredicted RBP13.65□□□□□ -0.22
SMG5-204ENST00000476954 PLGP00747 810 aaPredicted RBP13.65□□□□□ -0.22
SMG5-204ENST00000476954 CCDC166P0CW27 439 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 NR2F6P10588 404 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 ZNF37AP17032 561 aaPredicted RBP13.65□□□□□ -0.22
SMG5-204ENST00000476954 HK1P19367 917 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 IL11P20809 199 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 ADH6P28332 368 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 BUD31P41223 144 aaPredicted RBP13.65□□□□□ -0.22
SMG5-204ENST00000476954 CASP2P42575 452 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 HSPA7P48741 367 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 CDH11P55287 796 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 CHIT1Q13231 466 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 RAB35Q15286 201 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 SGCBQ16585 318 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMG5-204ENST00000476954 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 AGAP6Q5VW22 663 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 STEAP2Q8NFT2 490 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 SEMA6DQ8NFY4 1073 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 TMBIM1Q969X1 311 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 EFCAB11Q9BUY7 163 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 ZNF717Q9BY31 904 aaPredicted RBP13.65□□□□□ -0.22
SMG5-204ENST00000476954 STMN4Q9H169 189 aaPredicted RBP13.65□□□□□ -0.22
SMG5-204ENST00000476954 DSN1Q9H410 356 aa13.65□□□□□ -0.22
SMG5-204ENST00000476954 IGHV4-61A0A0C4DH41 118 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 OR2M5A3KFT3 312 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 VWC2LB2RUY7 222 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 GOLGA6L22H0YM25 854 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 NME6O75414 186 aaPredicted RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 GCM2O75603 506 aaPredicted RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 ALDOAP04075 364 aaKnown RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 FESP07332 822 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 MLNP12872 115 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 NT5EP21589 574 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 GAS1P54826 345 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 DDX39BQ13838 428 aaKnown RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 CRYMQ14894 314 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 PRR31Q5SQ13 230 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 MFSD12Q6NUT3 480 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 DRICH1Q6PGQ1 229 aaPredicted RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 FRA10AC1Q70Z53 315 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 SYCE1Q8N0S2 351 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 METTL25Q8N6Q8 603 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 ADCY4Q8NFM4 1077 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 OR4K17Q8NGC6 315 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 ANKRD49Q8WVL7 239 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 GMPPAQ96IJ6 420 aaPredicted RBP13.64□□□□□ -0.23
SMG5-204ENST00000476954 HBEGFQ99075 208 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 CAPS2Q9BXY5 557 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 PRRG4Q9BZD6 226 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 FAIMQ9NVQ4 179 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 FBXO34Q9NWN3 711 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 BCAP29Q9UHQ4 241 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 CAPN6Q9Y6Q1 641 aa13.64□□□□□ -0.23
SMG5-204ENST00000476954 SHISA8B8ZZ34 492 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 REM1O75628 298 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 RGS9O75916 674 aaPredicted RBP13.63□□□□□ -0.23
SMG5-204ENST00000476954 FCGR2AP12318 317 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
SMG5-204ENST00000476954 CREB1P16220 341 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 SRP14P37108 136 aaKnown RBP13.63□□□□□ -0.23
SMG5-204ENST00000476954 MAGEA3P43357 314 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 RAP1GDS1P52306 607 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 DSCR4P56555 118 aaPredicted RBP13.63□□□□□ -0.23
SMG5-204ENST00000476954 IRF8Q02556 426 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 MGAT2Q10469 447 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 HIST2H2ACQ16777 129 aaPredicted RBP13.63□□□□□ -0.23
SMG5-204ENST00000476954 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 RAD9BQ6WBX8 426 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 GGNQ86UU5 652 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 OR7G1Q8NGA0 311 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 RGMAQ96B86 450 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 CMTM7Q96FZ5 175 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 COL21A1Q96P44 957 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 ADOQ96SZ5 270 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 XAB2Q9HCS7 855 aaKnown RBP13.63□□□□□ -0.23
SMG5-204ENST00000476954 NGBQ9NPG2 151 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 FANCFQ9NPI8 374 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 CTNNAL1Q9UBT7 734 aa13.63□□□□□ -0.23
SMG5-204ENST00000476954 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms