RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SERHL2Q9H4I8 314 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 SACM1LQ9NTJ5 587 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 DDX18Q9NVP1 670 aaKnown RBP11.41□□□□□ -0.58
APTX-220ENST00000476858 AIG1Q9NVV5 245 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 NOP53Q9NZM5 478 aaKnown RBP11.41□□□□□ -0.58
APTX-220ENST00000476858 SEC14L3Q9UDX4 400 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 SH3BGRL2Q9UJC5 107 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 EIF3LQ9Y262 564 aaKnown RBP11.41□□□□□ -0.58
APTX-220ENST00000476858 GPR45Q9Y5Y3 372 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 KCNE3Q9Y6H6 103 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 USH1CQ9Y6N9 552 aa11.41□□□□□ -0.58
APTX-220ENST00000476858 SVILO95425 2214 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 A0A1W2PRB8 838 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 TO15178 435 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 ASNA1O43681 348 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 TSPAN2O60636 221 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 TRIM3O75382 744 aaPredicted RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 CRYABP02511 175 aaKnown RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 P04436 131 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 MAPK1P28482 360 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 GPC1P35052 558 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 MAP3K8P41279 467 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 CASP3P42574 277 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 CASP9P55211 416 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 C21orf58P58505 322 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 PPIAP62937 165 aaKnown RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 HBA1P69905 142 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 RPS6KA2Q15349 733 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 LSM12Q3MHD2 195 aaKnown RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 SPANXN4Q5MJ08 99 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 EXOSC6Q5RKV6 272 aaKnown RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 CPTPQ5TA50 214 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 OGFOD2Q6N063 350 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 C3P1Q6ZMU1 363 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 SPPL2CQ8IUH8 684 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 SAMD14Q8IZD0 417 aaPredicted RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 TAGAPQ8N103 731 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 SLC34A3Q8N130 599 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 SLC16A11Q8NCK7 471 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 C17orf47Q8NEP4 570 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 NUP43Q8NFH3 380 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 DIO2Q92813 273 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 MTERF3Q96E29 417 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 RILPQ96NA2 401 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 ADOQ96SZ5 270 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 KLHDC3Q9BQ90 382 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 FAM173AQ9BQD7 235 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 DUSP26Q9BV47 211 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 ACSS1Q9NUB1 689 aaPredicted RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 INTS9Q9NV88 658 aaKnown RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 NTMQ9P121 344 aa11.4□□□□□ -0.58
APTX-220ENST00000476858 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.4□□□□□ -0.58
APTX-220ENST00000476858 A0A1B0GTH9 108 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 KLRC4-KLRK1H3BQV0 150 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 TFECO14948 347 aaPredicted RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 CDC40O60508 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
APTX-220ENST00000476858 REM1O75628 298 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 CYP4B1P13584 511 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 PRPS1L1P21108 318 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 ENDOUP21128 410 aaKnown RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 IDH3AP50213 366 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 RPS26P62854 115 aaKnown RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 PLGLB1Q02325 96 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 SF3A3Q12874 501 aaKnown RBP eCLIP11.39□□□□□ -0.59
APTX-220ENST00000476858 C3AR1Q16581 482 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 DUSP5Q16690 384 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 SMU1Q2TAY7 513 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 NXNQ6DKJ4 435 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 HIST2H2BCQ6DN03 193 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 EPGNQ6UW88 154 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 SZRD1Q7Z422 152 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 TRIM42Q8IWZ5 723 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 RPRMLQ8N4K4 120 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 OR9I1Q8NGQ6 314 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 RFWD2Q8NHY2 731 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 PIWIL2Q8TC59 973 aaKnown RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 LRRC8CQ8TDW0 803 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 HOXB13Q92826 284 aaPredicted RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 ERP27Q96DN0 273 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 HSPBAP1Q96EW2 488 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 ZBED6CLQ96FA7 236 aaPredicted RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 SGCZQ96LD1 299 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 JSRP1Q96MG2 331 aaPredicted RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 C7orf26Q96N11 449 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 INPP5KQ9BT40 448 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 LMF2Q9BU23 707 aaKnown RBP11.39□□□□□ -0.59
APTX-220ENST00000476858 ANGPTL4Q9BY76 406 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 PRODH2Q9UF12 536 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 TINAGQ9UJW2 476 aa11.39□□□□□ -0.59
APTX-220ENST00000476858 CDK2AP1O14519 115 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 GNB5O14775 395 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 LRRTM2O43300 516 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 DIAPH2O60879 1101 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 ICOSLGO75144 302 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 SNUPNO95149 360 aaKnown RBP11.38□□□□□ -0.59
APTX-220ENST00000476858 GABRA3P34903 492 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 CDKN2CP42773 168 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 RFX3P48380 749 aa11.38□□□□□ -0.59
APTX-220ENST00000476858 TRPC1P48995 793 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms