RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 FRMD1Q8N878 549 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 GAL3ST3Q96A11 431 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF681Q96N22 645 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 YIPF4Q9BSR8 244 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 ANKRD19PQ9H560 264 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 LMAN1LQ9HAT1 526 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 HHATLQ9HCP6 504 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 SCHIP1Q9P0W5 487 aaPredicted RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 USP36Q9P275 1121 aaKnown RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 DUXAA6NLW8 204 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 CSO75390 466 aaKnown RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 SNX4O95219 450 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 STATHP02808 62 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 ALPPP05187 535 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 HOXB3P14651 431 aaPredicted RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 PSMA1P25786 263 aaKnown RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 KIAA1024LP59773 190 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 RAB8AP61006 207 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 RPS3AP61247 264 aaKnown RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 EFNB1P98172 346 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 RGS1Q08116 209 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 KRR1Q13601 381 aaKnown RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 INAVAQ3KP66 663 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 KLHL22Q53GT1 634 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 SOWAHCQ53LP3 525 aaPredicted RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF311Q5JNZ3 666 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 PAQR7Q86WK9 346 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 OR9Q1Q8NGQ5 310 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 GNPDA2Q8TDQ7 276 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 LCN9Q8WX39 176 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 NUAK2Q9H093 628 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 C6orf106Q9H6K1 298 aaPredicted RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 RNF167Q9H6Y7 350 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 DIMT1Q9UNQ2 313 aaKnown RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 CYP8B1Q9UNU6 501 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 GSAPA4D1B5 854 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 LRRC72A6NJI9 287 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 TLX2O43763 284 aaPredicted RBP15.43■□□□□ 0.06
TMEM53-208ENST00000476724 SEMA4FO95754 770 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 AGR2O95994 175 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 C8orf89P0DMQ9 161 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 HNRNPA2B1P22626 353 aaKnown RBP15.43■□□□□ 0.06
TMEM53-208ENST00000476724 DUSP2Q05923 314 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 SFSWAPQ12872 951 aaKnown RBP15.43■□□□□ 0.06
TMEM53-208ENST00000476724 MLLT11Q13015 90 aaPredicted RBP15.43■□□□□ 0.06
TMEM53-208ENST00000476724 FZD5Q13467 585 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 DNASE1L3Q13609 305 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF750Q32MQ0 723 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 ENPP7Q6UWV6 458 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 PARP16Q8N5Y8 322 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 NT5CQ8TCD5 201 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 OR1E3Q8WZA6 343 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 C16orf58Q96GQ5 468 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 SLC6A18Q96N87 628 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 ARHGDIGQ99819 225 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 ACTRT3Q9BYD9 372 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 SLC38A1Q9H2H9 487 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 POLMQ9NP87 494 aaPredicted RBP15.43■□□□□ 0.06
TMEM53-208ENST00000476724 ABCB10Q9NRK6 738 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 KLF15Q9UIH9 416 aa15.43■□□□□ 0.06
TMEM53-208ENST00000476724 MYL12BO14950 172 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 TPST2O60704 377 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 GPX5O75715 221 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 CYP7B1O75881 506 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 ALPPL2P10696 532 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 TAS2R41P59536 307 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 BTN3A2P78410 334 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 ST3GAL3Q11203 375 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 TRAM2Q15035 370 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 RBM12BQ8IXT5 1001 aaKnown RBP15.42■□□□□ 0.06
TMEM53-208ENST00000476724 ZBTB8BQ8NAP8 495 aaPredicted RBP15.42■□□□□ 0.06
TMEM53-208ENST00000476724 OR4E2Q8NGC2 313 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PRRG3Q9BZD7 231 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 POLR2J2Q9GZM3 115 aaKnown RBP15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PRDM6Q9NQX0 595 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 MRPS18AQ9NVS2 196 aaKnown RBP15.42■□□□□ 0.06
TMEM53-208ENST00000476724 KLHL28Q9NXS3 571 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 KLHL3Q9UH77 587 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PCOLCE2Q9UKZ9 415 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 STUB1Q9UNE7 303 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 C10orf142B7Z368 130 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 LOC110117498-PIK3R3F6TDL0 507 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PRKYO43930 277 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 RAB36O95755 333 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 IGHV4-34P06331 123 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 NR2F6P10588 404 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 IMPDH2P12268 514 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PRKAR1BP31321 381 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 MC3RP41968 323 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 NFATC4Q14934 902 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 SYT14P1Q58G82 188 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 SPANXN2Q5MJ10 180 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 SYT13Q7L8C5 426 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 RD3Q7Z3Z2 195 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 MRGPREQ86SM8 312 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 ASPGQ86U10 573 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 OR9A2Q8NGT5 310 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PIK3R3Q92569 461 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 FGF11Q92914 225 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 TSACCQ96A04 125 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms