RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 RAI1Q7Z5J4 1906 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 SH3D21A4FU49 640 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 C17orf51A8MQB3 221 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 A8MXE2 369 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 PLOD2O00469 737 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 SIAH2O43255 324 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 ZIC3O60481 467 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 ABCB7O75027 752 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 NME6O75414 186 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-228ENST00000476267 OR4F21O95013 312 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 TGM6O95932 706 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 HSD3B1P14060 373 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 CHMP24386 653 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 HSD3B2P26439 372 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
MRPL55-228ENST00000476267 HSD17B3P37058 310 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 PCYT1AP49585 367 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 STARP49675 285 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 SERPINB9P50453 376 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 CORO7P57737 925 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 B3GALT5-AS1P59052 145 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 CSTF3Q12996 717 aaKnown RBP11.88□□□□□ -0.51
MRPL55-228ENST00000476267 KEAP1Q14145 624 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 C8orf74Q6P047 294 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 LUZP2Q86TE4 346 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 GCNT2Q8N0V5 402 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 RDH11Q8TC12 318 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 INTS12Q96CB8 462 aaKnown RBP11.88□□□□□ -0.51
MRPL55-228ENST00000476267 TMCO6Q96DC7 493 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 SMR3AQ99954 134 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 BEX4Q9NWD9 120 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-228ENST00000476267 TAS2R10Q9NYW0 307 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 VPS29Q9UBQ0 182 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 UTS2RQ9UKP6 389 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 PSME2Q9UL46 239 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 SNX6Q9UNH7 406 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 DLGAP4Q9Y2H0 992 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 TESMINQ9Y4I5 508 aa11.88□□□□□ -0.51
MRPL55-228ENST00000476267 MED12LQ86YW9 2145 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 A0A1W2PNV4 684 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 MANBAO00462 879 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 INHBAP08476 426 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 IL3P08700 152 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 CHN1P15882 459 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 GCKP35557 465 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 ALDH9A1P49189 494 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 PNLIPRP2P54317 469 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 CLDN15P56746 228 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 SRYQ05066 204 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 CLCQ05315 142 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 POU4F3Q15319 338 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 UNC50Q53HI1 259 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 ZNF678Q5SXM1 525 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 BIVMQ86UB2 503 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 CCDC116Q8IYX3 515 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 GBP7Q8N8V2 638 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-228ENST00000476267 OR9A2Q8NGT5 310 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 C18orf12Q96KH6 178 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 ADOQ96SZ5 270 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 YIPF4Q9BSR8 244 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 FAIM2Q9BWQ8 316 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 ACPTQ9BZG2 426 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 ACBD3Q9H3P7 528 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 FOLH1BQ9HBA9 442 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 DMGDHQ9UI17 866 aaKnown RBP11.87□□□□□ -0.51
MRPL55-228ENST00000476267 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 ZNF780BQ9Y6R6 833 aa11.87□□□□□ -0.51
MRPL55-228ENST00000476267 MED12Q93074 2177 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 ACANP16112 2415 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 DEFB108AA8MXU0 73 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 TRIM49D1C9J1S8 452 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 PLOD3O60568 738 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 REM1O75628 298 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 BCAS2O75934 225 aaPredicted RBP11.86□□□□□ -0.51
MRPL55-228ENST00000476267 DRD2P14416 443 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 GRK2P25098 689 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 GCAP28676 217 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 CCKARP32238 428 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 HTR6P50406 440 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 PSPHP78330 225 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 PSG6Q00889 435 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 GAB1Q13480 694 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 BCL2A1Q16548 175 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 PRSS53Q2L4Q9 553 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 FBXW10Q5XX13 1052 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 GALNT18Q6P9A2 607 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 AAGABQ6PD74 315 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 CDYL2Q8N8U2 506 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 FADS6Q8N9I5 356 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 OR7G2Q8NG99 324 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 OR4N2Q8NGD1 307 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 KAT2AQ92830 837 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 STARD4Q96DR4 205 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 APIPQ96GX9 242 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 MARK4Q96L34 752 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 TMEM237Q96Q45 408 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 ZNF382Q96SR6 550 aa11.86□□□□□ -0.51
MRPL55-228ENST00000476267 NMRK1Q9NWW6 199 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms