RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PLIN5Q00G26 463 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 TNFRSF17Q02223 184 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 TRAP1Q12931 704 aaKnown RBP14.48□□□□□ -0.09
CPSF3-203ENST00000475482 RUNDC3AQ59EK9 446 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 OR52E8Q6IFG1 317 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ANKRD26P1Q6NSI1 321 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF621Q6ZSS3 439 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ANKRD46Q86W74 232 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 SLC15A3Q8IY34 581 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 OR4A15Q8NGL6 344 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 GOT1L1Q8NHS2 421 aaPredicted RBP14.48□□□□□ -0.09
CPSF3-203ENST00000475482 NUDT8Q8WV74 236 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 OR5P2Q8WZ92 322 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 JADE3Q92613 823 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 RELTQ969Z4 430 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 TMEM125Q96AQ2 219 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ASB9Q96DX5 294 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 CLPTM1LQ96KA5 538 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 SLC39A3Q9BRY0 314 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 THUMPD3Q9BV44 507 aaKnown RBP14.48□□□□□ -0.09
CPSF3-203ENST00000475482 HES7Q9BYE0 225 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 RAD21L1Q9H4I0 556 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ADAP2Q9NPF8 381 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ANKRD10Q9NXR5 420 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 TAS2R9Q9NYW1 312 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 VAPAQ9P0L0 249 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 UTS2RQ9UKP6 389 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 OSGIN2Q9Y236 505 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ATG4BQ9Y4P1 393 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 PCDHB14Q9Y5E9 798 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF780BQ9Y6R6 833 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 CACNA1DQ01668 2161 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 CENPEQ02224 2701 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 A0A1W2PR48 441 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 A8MUA0 341 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 GMNNO75496 209 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 WISP2O76076 250 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 AIFM1O95831 613 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 CLDN1O95832 211 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 SP1P08047 785 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 CD46P15529 392 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 PPP2R1BP30154 601 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 CLCN2P51788 898 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 MANFP55145 182 aaKnown RBP14.47□□□□□ -0.09
CPSF3-203ENST00000475482 SLC13A2Q13183 592 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 CEACAM7Q14002 265 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 TRIM25Q14258 630 aaKnown RBP14.47□□□□□ -0.09
CPSF3-203ENST00000475482 MLC1Q15049 377 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 SLC25A25Q6KCM7 469 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 SLC48A1Q6P1K1 146 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 HORMAD2Q8N7B1 307 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 STMN2Q93045 179 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 EXOSC8Q96B26 276 aaKnown RBP14.47□□□□□ -0.09
CPSF3-203ENST00000475482 CCDC124Q96CT7 223 aaKnown RBP14.47□□□□□ -0.09
CPSF3-203ENST00000475482 VMP1Q96GC9 406 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 BBS4Q96RK4 519 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 MAPKAP1Q9BPZ7 522 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 DEFB126Q9BYW3 111 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 TRIM15Q9C019 465 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 RASSF4Q9H2L5 321 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 ALG2Q9H553 416 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 SLC35C2Q9NQQ7 365 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 LRFN1Q9P244 771 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 CD300AQ9UGN4 299 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 POMPQ9Y244 141 aa14.47□□□□□ -0.09
CPSF3-203ENST00000475482 TRBV5-3A0A0A0MS03 114 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 TMEM200CA6NKL6 621 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 NME4O00746 187 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 LRRTM2O43300 516 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 KRT75O95678 551 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 MPIP34949 423 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 FRKP42685 505 aaPredicted RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 CYB561P49447 251 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 ST13P50502 369 aaKnown RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 HLCSP50747 726 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 IGLV3-21P80748 117 aaPredicted RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 PMP22Q01453 160 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 LIPEQ05469 1076 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 RIPK1Q13546 671 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 ELAVL1Q15717 326 aaKnown RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF385BQ569K4 471 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 DNAJC14Q6Y2X3 702 aaPredicted RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 TMEM178AQ8NBL3 297 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 C7orf57Q8NEG2 295 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 PTPMT1Q8WUK0 201 aaPredicted RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 TANKQ92844 425 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 ANKRD9Q96BM1 317 aaPredicted RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 FRMD6Q96NE9 622 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 KCTD14Q9BQ13 255 aaPredicted RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 INPP5KQ9BT40 448 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 SPATA9Q9BWV2 254 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 DENND2DQ9H6A0 471 aaPredicted RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 RPF2Q9H7B2 306 aaKnown RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 PNO1Q9NRX1 252 aaKnown RBP14.46□□□□□ -0.09
CPSF3-203ENST00000475482 CMTM6Q9NX76 183 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 SLAMF8Q9P0V8 285 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 GMEB1Q9Y692 573 aa14.46□□□□□ -0.09
CPSF3-203ENST00000475482 ITPR2Q14571 2701 aa14.45□□□□□ -0.1
CPSF3-203ENST00000475482 TRBV11-1A0A0K0K1C0 115 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms