RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 HRKO00198 91 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 ACOX3O15254 700 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 DPM1O60762 260 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 NKX2-2O95096 273 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 RECKO95980 971 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 IFNW1P05000 195 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 FESP07332 822 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 ZGLP1P0C6A0 271 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 TNFRSF1BP20333 461 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 AGXTP21549 392 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 TSPAN7P41732 249 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 KCNJ5P48544 419 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 EMDP50402 254 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 CHRNEQ04844 493 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 NSDHLQ15738 373 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 NRF1Q16656 503 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 DCST2Q5T1A1 773 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 OLIG3Q7RTU3 272 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 OVCH1Q7RTY7 1134 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 ZDHHC13Q8IUH4 622 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 TMEM151BQ8IW70 566 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 PLPP5Q8NEB5 264 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 OR14A16Q8NHC5 309 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 STT3BQ8TCJ2 826 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 GPR151Q8TDV0 419 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 FKBP10Q96AY3 582 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 NAF1Q96HR8 494 aaKnown RBP12.78□□□□□ -0.36
TRAF4-210ENST00000475329 FBXL20Q96IG2 436 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 ART5Q96L15 291 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF354BQ96LW1 612 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 CMKLR1Q99788 373 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 SLC29A1Q99808 456 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 PINK1Q9BXM7 581 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 OR10A5Q9H207 317 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 REEP1Q9H902 201 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 PARD6AQ9NPB6 346 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 POLE3Q9NRF9 147 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 IFT80Q9P2H3 777 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-210ENST00000475329 PRODH2Q9UF12 536 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 MKL2Q9ULH7 1088 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 LRCH1Q9Y2L9 728 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 WDR45Q9Y484 360 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 AK5Q9Y6K8 562 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 CLCA3PQ9Y6N3 262 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 A8MUA0 341 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 G3V2T6 193 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 EI24O14681 340 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 ADAMDEC1O15204 470 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 STX11O75558 287 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 DIRAS1O95057 198 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 PABPC4LP0CB38 370 aaKnown RBP12.77□□□□□ -0.37
TRAF4-210ENST00000475329 CCL4P13236 92 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 UQCRBP14927 111 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 GABRA3P34903 492 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 DCTP40126 519 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 OR1E2P47887 323 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 DAG1Q14118 895 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 DUSP7Q16829 419 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 CYP27C1Q4G0S4 372 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 IQCCQ4KMZ1 466 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 FRRS1Q6ZNA5 592 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 STK32CQ86UX6 486 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 CARM1Q86X55 608 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 HIPK1Q86Z02 1210 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF619Q8N2I2 560 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF615Q8N8J6 731 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 PTPMT1Q8WUK0 201 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-210ENST00000475329 APOBEC4Q8WW27 367 aaKnown RBP12.77□□□□□ -0.37
TRAF4-210ENST00000475329 PIK3R3Q92569 461 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF597Q96LX8 424 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 VSTM2LQ96N03 204 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF300Q96RE9 604 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-210ENST00000475329 SDF2Q99470 211 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF350Q9GZX5 532 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 Q9H521 79 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 MTHFD2LQ9H903 347 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-210ENST00000475329 SLC39A1Q9NY26 324 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 VNN3Q9NY84 501 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 NDUFAF4Q9P032 175 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 RAB26Q9ULW5 256 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 CFL2Q9Y281 166 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 SLC9A8Q9Y2E8 581 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 SH3GLB1Q9Y371 365 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 SAMHD1Q9Y3Z3 626 aaKnown RBP12.77□□□□□ -0.37
TRAF4-210ENST00000475329 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 ENPP4Q9Y6X5 453 aa12.77□□□□□ -0.37
TRAF4-210ENST00000475329 CACNA1HO95180 2353 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 GXYLT2A0PJZ3 443 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 PRAMEF25A6NGN4 478 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 MEN1O00255 615 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 SYT5O00445 386 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 KIAA0513O60268 411 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 FOXD2O60548 495 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 DNAJB5O75953 348 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 ZIC2O95409 532 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 HPRP00739 348 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 CLPSP04118 112 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 HEXBP07686 556 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 CYC1P08574 325 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms