RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 MRPS24Q96EL2 167 aaKnown RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 MVB12AQ96EY5 273 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 SAT2Q96F10 170 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 PNMA5Q96PV4 448 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 SLC38A2Q96QD8 506 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 KLF6Q99612 283 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ADAM2Q99965 735 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 TMEM9Q9P0T7 183 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 STOML2Q9UJZ1 356 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 PADI1Q9ULC6 663 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 TFR2Q9UP52 801 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 MAP4K5Q9Y4K4 846 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 LAMTOR5O43504 91 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 TLX2O43763 284 aaPredicted RBP4.59□□□□□ -1.68
NPHP3-206ENST00000474871 ASPAP45381 313 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 KCNK10P57789 538 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 SNRPEP62304 92 aaKnown RBP4.59□□□□□ -1.68
NPHP3-206ENST00000474871 DUOXA1Q1HG43 343 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 PDLIM3Q53GG5 364 aaPredicted RBP4.59□□□□□ -1.68
NPHP3-206ENST00000474871 PGBD2Q6P3X8 592 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 NPAS3Q8IXF0 933 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 OR2D3Q8NGH3 330 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 OR5M8Q8NGP6 311 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 MITD1Q8WV92 249 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 AP3S1Q92572 193 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 SLC41A3Q96GZ6 507 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 SMIM8Q96KF7 97 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 LRR1Q96L50 414 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 ZSWIM3Q96MP5 696 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 INSM2Q96T92 566 aaPredicted RBP4.59□□□□□ -1.68
NPHP3-206ENST00000474871 OCSTAMPQ9BR26 566 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 ABCB9Q9NP78 766 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 MGAT4CQ9UBM8 478 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 RNF14Q9UBS8 474 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 ALG6Q9Y672 507 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 SSC5DA1L4H1 1573 aa4.59□□□□□ -1.68
NPHP3-206ENST00000474871 KCNE1BA0A087WTH5 132 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 MAGEB17A8MXT2 336 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 ANHXE9PGG2 379 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 CYR61O00622 381 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 SOX15O60248 233 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 KCNE1P15382 129 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 IL1RNP18510 177 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 C5AR1P21730 350 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 TMBIM6P55061 237 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 SLC37A1P57057 533 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 FBXW4P57775 412 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 SNRPFP62306 86 aaKnown RBP4.58□□□□□ -1.68
NPHP3-206ENST00000474871 OGDHQ02218 1023 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 NME3Q13232 169 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 DCAF4L1Q3SXM0 396 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 TAF1BQ53T94 588 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM17Q86X19 198 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 LYG1Q8N1E2 194 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 HM13Q8TCT9 377 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 RAD54LQ92698 747 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 FAM46BQ96A09 425 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 ADIPOR1Q96A54 375 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 MCUR1Q96AQ8 359 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 RASD2Q96D21 266 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 MED8Q96G25 268 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 DMRTB1Q96MA1 342 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 CD180Q99467 661 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 STACQ99469 402 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 ACSS1Q9NUB1 689 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-206ENST00000474871 ADAM28Q9UKQ2 775 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 PCDHB1Q9Y5F3 818 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 UTRNP46939 3433 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 A0A1B0GTH6 734 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 CHADO15335 359 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 RAD1O60671 282 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 TTC4O95801 387 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 DRD1P21728 446 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 PXNP49023 591 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-206ENST00000474871 CDH15P55291 814 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 PTSQ03393 145 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 ARHGEF7Q14155 803 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 HNF4GQ14541 408 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 PTGR1Q14914 329 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM132DQ14C87 1099 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 PTCHD3Q3KNS1 767 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 C10orf91Q5T1B1 145 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 DHRS7BQ6IAN0 325 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-206ENST00000474871 SPRED1Q7Z699 444 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 ALYREFQ86V81 257 aaKnown RBP4.58□□□□□ -1.68
NPHP3-206ENST00000474871 LILRA2Q8N149 483 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 C2CD4AQ8NCU7 369 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-206ENST00000474871 CD99L2Q8TCZ2 262 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 LENG9Q96B70 501 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 OR2V2Q96R30 315 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 FSD1LQ9BXM9 530 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 RAB1BQ9H0U4 201 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 GSTO2Q9H4Y5 243 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 WDR41Q9HAD4 459 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 SLC28A3Q9HAS3 691 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 C11orf16Q9NQ32 467 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 CYSLTR2Q9NS75 346 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 TRBV11-1A0A0K0K1C0 115 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 A0A1W2PNV4 684 aa4.58□□□□□ -1.68
NPHP3-206ENST00000474871 TRBC2A0A5B9 178 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms