RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PRAMEF11O60813 436 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 CCNB2O95067 398 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 VNN2O95498 520 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ITGB2P05107 769 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ZNF735P0CB33 412 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ERGP11308 486 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 IFNGR1P15260 489 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 RHCEP18577 417 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 LHX1P48742 406 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 SOX8P57073 446 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ARHGAP1Q07960 439 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 BTN1A1Q13410 526 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PICALMQ13492 652 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 SERINC3Q13530 473 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 QPRTQ15274 297 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 EXOC3L2Q2M3D2 409 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 FAM174BQ3ZCQ3 159 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 MPP7Q5T2T1 576 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PGAP1Q75T13 922 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 TIGD4Q8IY51 512 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 NKAPQ8N5F7 415 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 KCNRGQ8N5I3 272 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PNPLA1Q8N8W4 532 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 SLC30A7Q8NEW0 376 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 OR56B4Q8NH76 319 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 GEMIN6Q8WXD5 167 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 MYLPFQ96A32 169 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PHF21BQ96EK2 531 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 RCC1LQ96I51 464 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 FAM167AQ96KS9 214 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 CITED4Q96RK1 184 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 CDCA3Q99618 268 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 CHCHD6Q9BRQ6 235 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 GSDMCQ9BYG8 508 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 C8orf33Q9H7E9 229 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 YARS2Q9Y2Z4 477 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 FAM96BQ9Y3D0 163 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PCDHGA5Q9Y5G8 931 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 MTCH2Q9Y6C9 303 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ENPP4Q9Y6X5 453 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 COL6A3P12111 3177 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 A0A1W2PRB8 838 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 CHURC1-FNTBB4DL54 471 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 INMT-MINDY4F8WBC2 141 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ETV2O00321 342 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 SCAMP2O15127 329 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 GALR2O43603 387 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 FOXS1O43638 330 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 SLC28A2O43868 658 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 CRYABP02511 175 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 TNNC2P02585 160 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 GUSBP08236 651 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 FCGR3AP08637 254 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 VSIG10L2P0DP72 767 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 HAPLN1P10915 354 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 TBXA2RP21731 343 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 EEF1B2P24534 225 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 NUP62P37198 522 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 PSMD4P55036 377 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 PCBP4P57723 403 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 PLAURQ03405 335 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 GPR17Q13304 367 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 RAB35Q15286 201 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 Q3ZCU0 254 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ZNF385BQ569K4 471 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 DDI2Q5TDH0 399 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 OR6B2Q6IFH4 312 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PDE12Q6L8Q7 609 aaKnown RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 TAPT1Q6NXT6 567 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 TMIGD1Q6UXZ0 262 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 FAM92BQ6ZTR7 304 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PLEKHM3Q6ZWE6 761 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 TAS1R1Q7RTX1 841 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 C6orf120Q7Z4R8 191 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 NETO2Q8NC67 525 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 B3GALNT2Q8NCR0 500 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 FBXO30Q8TB52 745 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 TEX47Q8TBZ9 253 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 OSTF1Q92882 214 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 RAB7BQ96AH8 199 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 SCARF2Q96GP6 870 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 ATXN7L3BQ96GX2 97 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 MSANTD3Q96H12 275 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 TMEM41AQ96HV5 264 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 C14orf144Q96I85 54 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 SAP130Q9H0E3 1048 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 CWH43Q9H720 699 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 IPPKQ9H8X2 491 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 SIRT3Q9NTG7 399 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 MED17Q9NVC6 651 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 UCKL1Q9NWZ5 548 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 NLGN3Q9NZ94 848 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 NFKBIL1Q9UBC1 381 aaPredicted RBP3.84□□□□□ -1.79
USP16-205ENST00000474835 PRKAG2Q9UGJ0 569 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 LIMD1Q9UGP4 676 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ACSL6Q9UKU0 697 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 KIAA1549Q9HCM3 1950 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 LINC00854A0A1B0GVQ3 168 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 EMC8O43402 210 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 FZD7O75084 574 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms