RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ZNF295-AS1Q8N0V1 137 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 FNDC5Q8NAU1 212 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 ADCY4Q8NFM4 1077 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 OR7G1Q8NGA0 311 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 GFM2Q969S9 779 aaKnown RBP13.88□□□□□ -0.19
VARS-223ENST00000474643 TP53INP1Q96A56 240 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 C11orf24Q96F05 449 aaPredicted RBP13.88□□□□□ -0.19
VARS-223ENST00000474643 CNRIP1Q96F85 164 aaPredicted RBP13.88□□□□□ -0.19
VARS-223ENST00000474643 RILPQ96NA2 401 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 TSSK3Q96PN8 268 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 ENKD1Q9H0I2 346 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 SLC6A15Q9H2J7 730 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 CCDC134Q9H6E4 229 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 SLC35C2Q9NQQ7 365 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 QPCTLQ9NXS2 382 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 EHD3Q9NZN3 535 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 HAO1Q9UJM8 370 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 HRH3Q9Y5N1 445 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 NPFFR2Q9Y5X5 522 aa13.88□□□□□ -0.19
VARS-223ENST00000474643 CHCHD2Q9Y6H1 151 aaPredicted RBP13.88□□□□□ -0.19
VARS-223ENST00000474643 A0A1B0GVC2 190 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 NPIPB8E9PQR5 432 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 AKAP10O43572 662 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 SNNO75324 88 aaPredicted RBP13.87□□□□□ -0.19
VARS-223ENST00000474643 SNX4O95219 450 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 ATP1B1P05026 303 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 CT62P0C5K7 136 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 GLI4P10075 376 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 MSX1P28360 303 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 MPIP34949 423 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 ASMTP46597 345 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 FBXW4P57775 412 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 KIAA0040Q15053 153 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.193e-8■■■■□ 26.4
VARS-223ENST00000474643 NNATQ16517 81 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 RFTN2Q52LD8 501 aaPredicted RBP13.87□□□□□ -0.19
VARS-223ENST00000474643 FAM71E1Q6IPT2 247 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 FAM111BQ6SJ93 734 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 PRR22Q8IZ63 422 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 FAM9CQ8IZT9 166 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 CLHC1Q8NHS4 586 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 NEIL3Q8TAT5 605 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 DYDC1Q8WWB3 177 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 CKAP2Q8WWK9 683 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 MAGEB18Q96M61 343 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 MANSC1Q9H8J5 431 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 THAP1Q9NVV9 213 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 GIMAP2Q9UG22 337 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 FBN2P35556 2912 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 DCHS2Q6V1P9 2916 aa13.87□□□□□ -0.19
VARS-223ENST00000474643 ZNF407Q9C0G0 2248 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 TACC2O95359 2948 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 TOXO94900 526 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 RFPL3SP0C7P2 107 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 DDX5P17844 614 aaKnown RBP13.86□□□□□ -0.19
VARS-223ENST00000474643 SDC1P18827 310 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 TACR1P25103 407 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 KRT20P35900 424 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 NCBP2P52298 156 aaKnown RBP eCLIP13.86□□□□□ -0.19
VARS-223ENST00000474643 PLCXD2Q0VAA5 305 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 MAD2L1Q13257 205 aaPredicted RBP13.86□□□□□ -0.19
VARS-223ENST00000474643 LTB4RQ15722 352 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 PRICKLE4Q2TBC4 344 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 SLC25A35Q3KQZ1 300 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 XKR7Q5GH72 579 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 LYPD8Q6UX82 237 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 MTERF4Q7Z6M4 381 aaKnown RBP13.86□□□□□ -0.19
VARS-223ENST00000474643 PM20D2Q8IYS1 436 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 ZNF75CPQ92670 426 aaPredicted RBP13.86□□□□□ -0.19
VARS-223ENST00000474643 PPCDCQ96CD2 204 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 EGLN2Q96KS0 407 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 C3orf30Q96M34 536 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 ZNF681Q96N22 645 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 SECISBP2Q96T21 854 aaKnown RBP13.86□□□□□ -0.19
VARS-223ENST00000474643 C1orf50Q9BV19 199 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 C20orf27Q9GZN8 174 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 SH2D2AQ9NP31 389 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 ACKR4Q9NPB9 350 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 MAT2BQ9NZL9 334 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 KLRF1Q9NZS2 232 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 SH3BP4Q9P0V3 963 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 SPRR3Q9UBC9 169 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 BAIAP2L1Q9UHR4 511 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 CNOT11Q9UKZ1 510 aaKnown RBP13.86□□□□□ -0.19
VARS-223ENST00000474643 CAMK2AQ9UQM7 478 aa13.86□□□□□ -0.19
VARS-223ENST00000474643 EIF3LQ9Y262 564 aaKnown RBP13.86□□□□□ -0.19
VARS-223ENST00000474643 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 LRRC3CA6NJW4 275 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 HSPB2A8KAH6 182 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 JUNP05412 331 aaKnown RBP13.85□□□□□ -0.19
VARS-223ENST00000474643 KITP10721 976 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 BCKDHAP12694 445 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 PCSK2P16519 638 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 ABCD3P28288 659 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 UQCRC1P31930 480 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 HPCAL1P37235 193 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 MRPS35P82673 323 aaKnown RBP13.85□□□□□ -0.19
VARS-223ENST00000474643 DUSP2Q05923 314 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 FUT7Q11130 342 aa13.85□□□□□ -0.19
VARS-223ENST00000474643 MAP4K2Q12851 820 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms