RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TMED5Q9Y3A6 229 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 PCDHGB3Q9Y5G1 929 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 EML6Q6ZMW3 1958 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 LRBAP50851 2863 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 C2orf72A6NCS6 295 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 PRAMEF25A6NGN4 478 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 UPK1AO00322 258 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 GNB5O14775 395 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 PIP5K1BO14986 540 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 AKAP10O43572 662 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 TSPAN2O60636 221 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 TBX19O60806 448 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 COQ9O75208 318 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 GLI4P10075 376 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 PRF1P14222 555 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 COX6B1P14854 86 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 GABRA1P14867 456 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 SDC1P18827 310 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 PTPN6P29350 595 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 CHRNB4P30926 498 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 KRT20P35900 424 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 PTGDSP41222 190 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 MC3RP41968 323 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 ETV4P43268 484 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 KIR3DL1P43629 444 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 PNLIPRP2P54317 469 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 RPL38P63173 70 aaKnown RBP10.22□□□□□ -0.77
CKS1B-206ENST00000474215 EFR3AQ14156 821 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 TOMM20Q15388 145 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 GALNTL6Q49A17 601 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 SH2D4BQ5SQS7 431 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 RTL6Q6ICC9 239 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 TMEM107Q6UX40 140 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 ANGPTL8Q6UXH0 198 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 NPSR1Q6W5P4 371 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 B3GNT6Q6ZMB0 384 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 LARP4Q71RC2 724 aaKnown RBP eCLIP10.22□□□□□ -0.776e-9■■■□□ 18.1
CKS1B-206ENST00000474215 CCDC71Q8IV32 467 aaPredicted RBP10.22□□□□□ -0.77
CKS1B-206ENST00000474215 NUDCD3Q8IVD9 361 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 OR2L13Q8N349 312 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 OR10Q1Q8NGQ4 319 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 OR1J4Q8NGS1 313 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 AGR3Q8TD06 166 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 GFM2Q969S9 779 aaKnown RBP10.22□□□□□ -0.77
CKS1B-206ENST00000474215 PPCDCQ96CD2 204 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF764Q96H86 408 aaPredicted RBP10.22□□□□□ -0.77
CKS1B-206ENST00000474215 TSSK3Q96PN8 268 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 ADOQ96SZ5 270 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 TIMP4Q99727 224 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 OSBPL11Q9BXB4 747 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 REEP4Q9H6H4 257 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 GALNT9Q9HCQ5 603 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 DDX18Q9NVP1 670 aaKnown RBP10.22□□□□□ -0.77
CKS1B-206ENST00000474215 KLRF1Q9NZS2 232 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 OR10H1Q9Y4A9 318 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 FAM215AQ9Y5M1 114 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 NOTCH2Q04721 2471 aa10.22□□□□□ -0.77
CKS1B-206ENST00000474215 C15orf38-AP3S2A0A0A6YYH1 394 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 AHRRA9YTQ3 701 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 C19orf84I3L1E1 186 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 PDPK1O15530 556 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 PEX11AO75192 247 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 CBR3O75828 277 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 PSMG1O95456 288 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 SNRPB2P08579 225 aaKnown RBP10.21□□□□□ -0.77
CKS1B-206ENST00000474215 IFI6P09912 130 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 BCKDHAP12694 445 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 IL12BP29460 328 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 ARRB2P32121 409 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 PTGER4P35408 488 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 ASMTP46597 345 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 SERPINB4P48594 390 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 MRPS22P82650 360 aaKnown RBP10.21□□□□□ -0.77
CKS1B-206ENST00000474215 PSG6Q00889 435 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF155Q12901 538 aaPredicted RBP10.21□□□□□ -0.77
CKS1B-206ENST00000474215 CYP27C1Q4G0S4 372 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 C1orf185Q5T7R7 199 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 VASNQ6EMK4 673 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 ANKRD26P1Q6NSI1 321 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF551Q7Z340 670 aaPredicted RBP10.21□□□□□ -0.77
CKS1B-206ENST00000474215 EXOC3L1Q86VI1 746 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 MCEMP1Q8IX19 187 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 ULK2Q8IYT8 1036 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 WDSUB1Q8N9V3 476 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 OR4N2Q8NGD1 307 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 MTERF3Q96E29 417 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 PPP3R2Q96LZ3 170 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 CENPHQ9H3R5 247 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 SSU72Q9NP77 194 aaKnown RBP10.21□□□□□ -0.77
CKS1B-206ENST00000474215 KCNJ16Q9NPI9 418 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 SH3BP4Q9P0V3 963 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 ZDHHC2Q9UIJ5 367 aa10.21□□□□□ -0.77
CKS1B-206ENST00000474215 NCOA6Q14686 2063 aaPredicted RBP10.21□□□□□ -0.78
CKS1B-206ENST00000474215 TMEM114B3SHH9 223 aa10.2□□□□□ -0.78
CKS1B-206ENST00000474215 FAM47E-STBD1D6RA91 191 aa10.2□□□□□ -0.78
CKS1B-206ENST00000474215 SNPHO15079 494 aa10.2□□□□□ -0.78
CKS1B-206ENST00000474215 BIRC5O15392 142 aa10.2□□□□□ -0.78
CKS1B-206ENST00000474215 MAPK1P28482 360 aa10.2□□□□□ -0.78
CKS1B-206ENST00000474215 GPC1P35052 558 aa10.2□□□□□ -0.78
CKS1B-206ENST00000474215 MANFP55145 182 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms