RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PLA2G10O15496 165 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 IL1AP01583 271 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 CSF2P04141 144 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 THY1P04216 161 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 DRD3P35462 400 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 WNT4P56705 351 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 RPA4Q13156 261 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 FZD5Q13467 585 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 C1DQ13901 141 aaKnown RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 PUS10Q3MIT2 529 aaKnown RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 PIP5KL1Q5T9C9 394 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 FAM46CQ5VWP2 391 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF544Q6NX49 715 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 TMEM107Q6UX40 140 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 FAM131AQ6UXB0 335 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 DGLUCYQ7Z3D6 616 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 LRRTM4Q86VH4 590 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 GLCCI1Q86VQ1 547 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 VRK2Q86Y07 508 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 NATD1Q8N6N6 113 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 RASSF5Q8WWW0 418 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 RNFT2Q96EX2 444 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 PRRC1Q96M27 445 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 INSM2Q96T92 566 aaPredicted RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 TRMT61BQ9BVS5 477 aaKnown RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SAP130Q9H0E3 1048 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SEMA4GQ9NTN9 838 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SERGEFQ9UGK8 458 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 IL20RAQ9UHF4 553 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 KLHL20Q9Y2M5 609 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 C2orf16Q68DN1 1984 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 STK25O00506 426 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SCAMP1O15126 338 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 CH25HO95992 272 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 KRT8P05787 483 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 COX10Q12887 443 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 KIAA1161Q6NSJ0 714 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 ADAMTSL4Q6UY14 1074 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 LHFPL3Q86UP9 236 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SHISA5Q8N114 240 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 FBXL6Q8N531 539 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 CAMKK1Q8N5S9 505 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 C12orf76Q8N812 135 aaPredicted RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SIMC1Q8NDZ2 872 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 OR4F15Q8NGB8 312 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SPPL3Q8TCT6 385 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 CXorf40AQ8TE69 158 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 WFIKKN2Q8TEU8 576 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF764Q96H86 408 aaPredicted RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 FAM46AQ96IP4 442 aaKnown RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 FYTTD1Q96QD9 318 aaKnown RBP10.28□□□□□ -0.76
C9orf3-214ENST00000473778 PHOX2BQ99453 314 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 COQ7Q99807 217 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 DHRS9Q9BPW9 319 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF649Q9BS31 505 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 BEX2Q9BXY8 128 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SLC7A5P2Q9GIP4 190 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 SLC38A1Q9H2H9 487 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 NPAP1Q9NZP6 1156 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 LIPT1Q9Y234 373 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 ASB4Q9Y574 426 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 OR52A4PA6NMU1 304 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 CACNB4O00305 520 aaPredicted RBP10.27□□□□□ -0.77
C9orf3-214ENST00000473778 SLC9A3R1O14745 358 aaPredicted RBP10.27□□□□□ -0.77
C9orf3-214ENST00000473778 NCR1O76036 304 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 FGF19O95750 216 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 ACP2P11117 423 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 NAT2P11245 290 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 ACP5P13686 325 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 KIR2DL3P43628 341 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 DAB2P98082 770 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 RUNX1T1Q06455 604 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 P2RY14Q15391 338 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 TBRG1Q3YBR2 411 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 PLK5Q496M5 336 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 CDONQ4KMG0 1287 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 Q5BKY6 102 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 C3orf38Q5JPI3 329 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 VASNQ6EMK4 673 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 SLC30A6Q6NXT4 461 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 LSMEM1Q8N8F7 131 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 ATP6V1C2Q8NEY4 427 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 BBS1Q8NFJ9 593 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 TMEM163Q8TC26 289 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 MS4A6EQ96DS6 147 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 C1GALT1C1Q96EU7 318 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 DIRAS2Q96HU8 199 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 GDF15Q99988 308 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 TTYH2Q9BSA4 534 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 BCL2L10Q9HD36 194 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 SLC6A20Q9NP91 592 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 EQTNQ9NQ60 294 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 PRDM7Q9NQW5 492 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 MRPS18AQ9NVS2 196 aaKnown RBP10.27□□□□□ -0.77
C9orf3-214ENST00000473778 SLC9A8Q9Y2E8 581 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 MRPS23Q9Y3D9 190 aaKnown RBP10.27□□□□□ -0.77
C9orf3-214ENST00000473778 INSL6Q9Y581 213 aa10.27□□□□□ -0.77
C9orf3-214ENST00000473778 CARNS1A5YM72 827 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms