RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 FREM3P0C091 2139 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 CACNA1CQ13936 2221 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 TRGV8A0A0C4DH27 118 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 MYO1GB0I1T2 1018 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 E9PBE3 544 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 ANKRD28O15084 1053 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 UBDO15205 165 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 PRKNO60260 465 aaPredicted RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 CLPSP04118 112 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 IGKV3-11P04433 115 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.061e-12■■■■■ 61.2
SMC4-213ENST00000472282 LAMP1P11279 417 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 PRF1P14222 555 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 PRPS1L1P21108 318 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 NCBP2P52298 156 aaKnown RBP eCLIP8.44□□□□□ -1.062e-17■■■■■ 76.5
SMC4-213ENST00000472282 MRPS35P82673 323 aaKnown RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 SF3A3Q12874 501 aaKnown RBP eCLIP8.44□□□□□ -1.064e-10■■■■■ 210.9
SMC4-213ENST00000472282 EXOSC7Q15024 291 aaKnown RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 CGB2Q6NT52 195 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 NCCRP1Q6ZVX7 275 aaPredicted RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 GALNTL5Q7Z4T8 443 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 RPS19BP1Q86WX3 136 aaKnown RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 RIMKLAQ8IXN7 391 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 ZNF675Q8TD23 568 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 THAP3Q8WTV1 239 aaPredicted RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 ITLN2Q8WWU7 325 aaPredicted RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 KAT2AQ92830 837 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 MTERF3Q96E29 417 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 CCDC120Q96HB5 630 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 MEGF10Q96KG7 1140 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 FRMD6Q96NE9 622 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 UTP23Q9BRU9 249 aaKnown RBP8.44□□□□□ -1.06
SMC4-213ENST00000472282 DEFB126Q9BYW3 111 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 GLIPR2Q9H4G4 154 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 TAS2R7Q9NYW3 318 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 SEC14L3Q9UDX4 400 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 ATP6V1HQ9UI12 483 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 TEKT2Q9UIF3 430 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 GPR45Q9Y5Y3 372 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 PCNX1Q96RV3 2341 aa8.44□□□□□ -1.06
SMC4-213ENST00000472282 PRRC2CQ9Y520 2896 aaKnown RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 HCFC1P51610 2035 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 A0A0G2JND7 137 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 A0A1B0GUH1 482 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 ASPDHA6ND91 283 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 C9JVG2 144 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 ZFAND5O76080 213 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 CBX7O95931 251 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 CRYABP02511 175 aaKnown RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 SP1P08047 785 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 IDO1P14902 403 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 PCSK2P16519 638 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 DDX5P17844 614 aaKnown RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 S1PR1P21453 382 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 MPIP34949 423 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 SOX18P35713 384 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 MC3RP41968 323 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 FRKP42685 505 aaPredicted RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 CA7P43166 264 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 PER3P56645 1201 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 SLC37A1P57057 533 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 MLF1P58340 268 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 C21orf58P58505 322 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 UFM1P61960 85 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 RNF4P78317 190 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 HSF1Q00613 529 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 OC90Q02509 493 aaPredicted RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 MGAT2Q10469 447 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 FUT7Q11130 342 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 MAP4K2Q12851 820 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 HSPB3Q12988 150 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 DUSP8Q13202 625 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 CDSNQ15517 529 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 C3AR1Q16581 482 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 PGS1Q32NB8 556 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 PDCD4Q53EL6 469 aaKnown RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 TRMT12Q53H54 448 aaKnown RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 ZNF628Q5EBL2 1059 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 CPTPQ5TA50 214 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 OR4F3Q6IEY1 312 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 HSDL2Q6YN16 418 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 C16orf47Q6ZP98 133 aaPredicted RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 ZNF551Q7Z340 670 aaPredicted RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 CHERPQ8IWX8 916 aaKnown RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 C9orf40Q8IXQ3 194 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 SLC5A8Q8N695 610 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 SIMC1Q8NDZ2 872 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 DNAJB8Q8NHS0 232 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 ZFP28Q8NHY6 868 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 CTHRC1Q96CG8 243 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 ZBED6CLQ96FA7 236 aaPredicted RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 TEX37Q96LM6 180 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 AMDHD1Q96NU7 426 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 ZNF317Q96PQ6 595 aaPredicted RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 GAL3ST4Q96RP7 486 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 SIKE1Q9BRV8 207 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 CCDC28BQ9BUN5 200 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 ANKRA2Q9H9E1 313 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms