RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 HBMQ6B0K9 141 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 FCRLBQ6BAA4 426 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 MOB3CQ70IA8 216 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 HSD11B1LQ7Z5J1 315 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CNTD1Q8N815 330 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 TRIB3Q96RU7 358 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CCDC187A0A096LP49 1063 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 A6NIZ1 184 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PTGESO14684 152 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 TSPAN12O95859 305 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CDK4P11802 303 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 IL3RAP26951 378 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 EIF2B2P49770 351 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 IDH3AP50213 366 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 RAP1BP61224 184 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 RAP1AP62834 184 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 EIF2B1Q14232 305 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 MEP1AQ16819 746 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 SLX4IPQ5VYV7 408 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 SLC22A10Q63ZE4 541 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 NIPAL3Q6P499 406 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CARM1Q86X55 608 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 SYNPOQ8N3V7 929 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 INO80EQ8NBZ0 244 aaPredicted RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 AKAP1Q92667 903 aaKnown RBP eCLIP8.13□□□□□ -1.11
CD47-204ENST00000471694 MYADMQ96S97 322 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 TIMM29Q9BSF4 260 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 OCEL1Q9H607 264 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PAK6Q9NQU5 681 aaPredicted RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 FADS3Q9Y5Q0 445 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PIK3C2AO00443 1686 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 ZNF891A8MT65 544 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 ZNF780AO75290 641 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 HNF1AP20823 631 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 ENPP1P22413 925 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 CRHBPP24387 322 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 AKR1C2P52895 323 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 GPLD1P80108 840 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FAPQ12884 760 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 PERM1Q5SV97 790 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 TMED4Q7Z7H5 227 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 NODALQ96S42 347 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 GATA5Q9BWX5 397 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 R3HDMLQ9H3Y0 253 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FGF21Q9NSA1 209 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 ACTL7AQ9Y615 435 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 MON2Q7Z3U7 1717 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 PRSS51A0A1B0GVH4 220 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 SURF4O15260 269 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 GRIA1P42261 906 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 SMAD2Q15796 467 aaKnown RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 NDUFAF5Q5TEU4 345 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 AWAT2Q6E213 333 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 TRMT10BQ6PF06 316 aaKnown RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 SLC16A14Q7RTX9 510 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 UBE2Q1Q7Z7E8 422 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 HUS1BQ8NHY5 278 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FAM71F1Q96KD3 344 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 ADOQ96SZ5 270 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 TSPAN10Q9H1Z9 355 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 SLC6A15Q9H2J7 730 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 MMP17Q9ULZ9 603 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 COLQQ9Y215 455 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 MDFIC2A0A1B0GVS7 189 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 PROM1O43490 865 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 AHSGP02765 367 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 DBHP09172 617 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 RAP2AP10114 183 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 GGT5P36269 586 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FXYD6P3P58550 94 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 IER5LQ5T953 404 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 DHRS13Q6UX07 377 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 SPEM1Q8N4L4 309 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 TBC1D20Q96BZ9 403 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 DCLRE1CQ96SD1 692 aaKnown RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 ULBP2Q9BZM5 246 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 C6orf106Q9H6K1 298 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 PAK1IP1Q9NWT1 392 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 DHCR7Q9UBM7 475 aaKnown RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 ZNF69Q9UC07 566 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 KCNIP3Q9Y2W7 256 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 CCDC163A0A0D9SF12 145 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 STMND1H3BQB6 276 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 TLX2O43763 284 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 RASAL1O95294 804 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 EPOP01588 193 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 SFTPCP11686 197 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 RPL13AP3Q6NVV1 102 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 UTS2BQ765I0 119 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FBXL14Q8N1E6 418 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 SCRN2Q96FV2 425 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 TRMT2BQ96GJ1 504 aaKnown RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 SLC2A13Q96QE2 648 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 CIB1Q99828 191 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 NUDT22Q9BRQ3 303 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 MED28Q9H204 178 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 C8orf4Q9NR00 106 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms