RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZG16BQ96DA0 208 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 OR6C1Q96RD1 312 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 MBOAT4Q96T53 435 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 WFDC6Q9BQY6 131 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 SLC7A5P2Q9GIP4 190 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 RHCGQ9UBD6 479 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 WDR45Q9Y484 360 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ASCC3Q8N3C0 2202 aaKnown RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 H0YAE9 185 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 M0R3H8 397 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 KHNYNO15037 678 aaKnown RBP16.9■□□□□ 0.3
SMC4-211ENST00000469858 PABPC4LP0CB38 370 aaKnown RBP16.9■□□□□ 0.3
SMC4-211ENST00000469858 S1PR1P21453 382 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 SSTR4P31391 388 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 DAPP51397 102 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 DUSP3P51452 185 aaPredicted RBP16.9■□□□□ 0.3
SMC4-211ENST00000469858 PGDP52209 483 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 RAD23AP54725 363 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 EPS8Q12929 822 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 ZNF267Q14586 743 aaPredicted RBP16.9■□□□□ 0.3
SMC4-211ENST00000469858 MINDY4Q4G0A6 757 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 ZNF311Q5JNZ3 666 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 ARHGAP40Q5TG30 622 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 YOD1Q5VVQ6 348 aaPredicted RBP16.9■□□□□ 0.3
SMC4-211ENST00000469858 VRK2Q86Y07 508 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 ATG16L2Q8NAA4 619 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 PTCHD1Q96NR3 888 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 OR1F2PQ96R84 312 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 GFM1Q96RP9 751 aaKnown RBP16.9■□□□□ 0.3
SMC4-211ENST00000469858 STACQ99469 402 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 CNPPD1Q9BV87 410 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 DUSP22Q9NRW4 184 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 R4GN57 208 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 RALGAPA1Q6GYQ0 2036 aa16.9■□□□□ 0.3
SMC4-211ENST00000469858 MITFO75030 526 aaPredicted RBP16.89■□□□□ 0.3
SMC4-211ENST00000469858 EPPINO95925 133 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 KCNAB2Q13303 367 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 SERTAD2Q14140 314 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 EXOC3L2Q2M3D2 409 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 DCST2Q5T1A1 773 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 PHF19Q5T6S3 580 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 ZNF605Q86T29 641 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 OR4C15Q8NGM1 316 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 SDF2Q99470 211 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 PINK1Q9BXM7 581 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 PNPLA3Q9NST1 481 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 SLC9A8Q9Y2E8 581 aa16.89■□□□□ 0.3
SMC4-211ENST00000469858 GADD45GO95257 159 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 TNFAIP8O95379 198 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 FUT4P22083 530 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 GABRA3P34903 492 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 PIGAP37287 484 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 RFX4Q33E94 735 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 KDM4DQ6B0I6 523 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 TYW3Q6IPR3 259 aaKnown RBP16.89■□□□□ 0.29
SMC4-211ENST00000469858 TCTN3Q6NUS6 607 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 ZNF555Q8NEP9 628 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 OR52P1PQ8NH57 321 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 GIPC3Q8TF64 312 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 CNDP2Q96KP4 475 aaKnown RBP16.89■□□□□ 0.29
SMC4-211ENST00000469858 ACER3Q9NUN7 267 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 FAM118AQ9NWS6 357 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 SRPK3Q9UPE1 567 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 ERVK-19Q9WJR5 959 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 MMACHCQ9Y4U1 282 aa16.89■□□□□ 0.29
SMC4-211ENST00000469858 FFAR1O14842 300 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 SEMA7AO75326 666 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 SEC24DO94855 1032 aaPredicted RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 LGI1O95970 557 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 TNNI3P19429 210 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 MAP3K8P41279 467 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 VWA2Q5GFL6 755 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 USP51Q70EK9 711 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 CHDHQ8NE62 594 aaPredicted RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 PHF10Q8WUB8 498 aaKnown RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 TSLPQ969D9 159 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 LOXL4Q96JB6 756 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 PELOQ9BRX2 385 aaKnown RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 ZNF350Q9GZX5 532 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 FOLH1BQ9HBA9 442 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 BATF3Q9NR55 127 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 SLC13A4Q9UKG4 626 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 SATB2Q9UPW6 733 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 HEMK1Q9Y5R4 338 aaPredicted RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 TTC28Q96AY4 2481 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 GXYLT2A0PJZ3 443 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 EMDP50402 254 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 POU6F2P78424 691 aaPredicted RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 GPR68Q15743 365 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 FIGNL1Q6PIW4 674 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 PRSS58Q8IYP2 241 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 TAGAPQ8N103 731 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 OR10G2Q8NGC3 310 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 ATOH1Q92858 354 aaPredicted RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 TRIM45Q9H8W5 580 aaPredicted RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 MTHFD2LQ9H903 347 aaPredicted RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 CACYBPQ9HB71 228 aaKnown RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 PNO1Q9NRX1 252 aaKnown RBP16.88■□□□□ 0.29
SMC4-211ENST00000469858 KRT84Q9NSB2 600 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 KCND3Q9UK17 655 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms