RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 CHRM4P08173 479 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 CKMT2P17540 419 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 CD247P20963 164 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 MAOAP21397 527 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 TGM1P22735 817 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 TLX1P31314 330 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-208ENST00000468300 TP53BP2Q13625 1128 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 NDUFA9Q16795 377 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF630Q2M218 657 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-208ENST00000468300 HEPHL1Q6MZM0 1159 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 TTLL10Q6ZVT0 673 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 EID3Q8N140 333 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 ZSCAN1Q8NBB4 408 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 NUP43Q8NFH3 380 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 GPR32P1Q8NGA4 272 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 ZFP28Q8NHY6 868 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 SLC35A4Q96G79 324 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 OCIAD1Q9NX40 245 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 CCDC88CQ9P219 2028 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 DSPPQ9NZW4 1301 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 D6RAR5 112 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 GPR37O15354 613 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 PLOD3O60568 738 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 CTNSO60931 367 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 OPN1SWP03999 348 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 IFI6P09912 130 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 SLC35E2P0CK97 266 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 RNH1P13489 461 aaKnown RBP7.71□□□□□ -1.18
BRCA1-208ENST00000468300 PRKAR1BP31321 381 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 ITGA1P56199 1179 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 SELENOWP63302 87 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 DUSP7Q16829 419 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 CYBRD1Q53TN4 286 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 IZUMO2Q6UXV1 221 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 ZC3H7AQ8IWR0 971 aaKnown RBP7.71□□□□□ -1.18
BRCA1-208ENST00000468300 AMER2Q8N7J2 671 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 TMEM19Q96HH6 336 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 HSH2DQ96JZ2 352 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 SLC35G5Q96KT7 338 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 OR7D2Q96RA2 312 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 CIB1Q99828 191 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 KLHL4Q9C0H6 718 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 COQ10BQ9H8M1 238 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 APMAPQ9HDC9 416 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 IL1RAPQ9NPH3 570 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 SEMA3GQ9NS98 782 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 PSME2Q9UL46 239 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 C19orf53Q9UNZ5 99 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-208ENST00000468300 CHST2Q9Y4C5 530 aa7.71□□□□□ -1.18
BRCA1-208ENST00000468300 A0A087WV62 115 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 HNRNPCL2B2RXH8 293 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 TNFRSF10AO00220 468 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 DSCR3O14972 297 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 MFN2O95140 757 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 BCHEP06276 602 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 GLAP06280 429 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF806P0C7X5 589 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ACP2P11117 423 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 TNFRSF1BP20333 461 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 IL10P22301 178 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 GPC1P35052 558 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 IST1P53990 364 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 FOXL2P58012 376 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PUM1Q14671 1186 aaKnown RBP eCLIP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 LASP1Q14847 261 aaKnown RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 MINDY4Q4G0A6 757 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 LAIR1Q6GTX8 287 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 LCN10Q6JVE6 187 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PWWP2BQ6NUJ5 590 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 MFSD12Q6NUT3 480 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF595Q8IYB9 648 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 GALNT15Q8N3T1 639 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 SLC16A11Q8NCK7 471 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PRSS33Q8NF86 280 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 OR56A1Q8NGH5 318 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PMEPA1Q969W9 287 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 COL26A1Q96A83 441 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 MOAP1Q96BY2 351 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 MVB12AQ96EY5 273 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 CENPNQ96H22 339 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 RAD21L1Q9H4I0 556 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PTGFRNQ9P2B2 879 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 CNOT11Q9UKZ1 510 aaKnown RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 CLOCKO15516 846 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PGM3O95394 542 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 XCR1P46094 333 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PRKAG1P54619 331 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 RHAGQ02094 409 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 MAP4K2Q12851 820 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 SPDYE7PQ495Y7 208 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 CYP27C1Q4G0S4 372 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 FAM98BQ52LJ0 330 aaKnown RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 CMPK2Q5EBM0 449 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ANKRD34AQ69YU3 496 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 REEP3Q6NUK4 255 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 NIPAL1Q6NVV3 410 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 CLEC2AQ6UVW9 174 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PRR23CQ6ZRP0 262 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PIWIL3Q7Z3Z3 882 aaKnown RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 OR4D11Q8NGI4 311 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms