RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 L3HYPDHQ96EM0 354 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 VSTM2LQ96N03 204 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 ADOQ96SZ5 270 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 G6PC3Q9BUM1 346 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 ST6GALNAC2Q9UJ37 374 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 FBXL2Q9UKC9 423 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 TSPAN2O60636 221 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 CBR3O75828 277 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 TIA1P31483 386 aaKnown RBP eCLIP22.25■■□□□ 1.15
PTCH1-210ENST00000468211 STARP49675 285 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 FOXA1P55317 472 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 SRYQ05066 204 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 BTKQ06187 659 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 ACSM2AQ08AH3 577 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 ACSM2BQ68CK6 577 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 CDC20BQ86Y33 519 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 GBP7Q8N8V2 638 aaPredicted RBP22.25■■□□□ 1.15
PTCH1-210ENST00000468211 OR14L1PQ8NHC6 308 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 MZB1Q8WU39 189 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 FAM222BQ8WU58 562 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 SLC35A4Q96G79 324 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 GSTO2Q9H4Y5 243 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 JKAMPQ9P055 326 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 EMCNQ9ULC0 261 aa22.25■■□□□ 1.15
PTCH1-210ENST00000468211 ACANP16112 2415 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 UBFD1O14562 309 aaKnown RBP22.24■■□□□ 1.15
PTCH1-210ENST00000468211 ERN1O75460 977 aaKnown RBP22.24■■□□□ 1.15
PTCH1-210ENST00000468211 PYGBP11216 843 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 CYP4B1P13584 511 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 PEX19P40855 299 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 GFRA1P56159 465 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 LCP2Q13094 533 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 RCAN2Q14206 197 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 CEBPEQ15744 281 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 SPIN4Q56A73 249 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 OR5M10Q6IEU7 315 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 GALNT18Q6P9A2 607 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 TRMT10CQ7L0Y3 403 aaKnown RBP22.24■■□□□ 1.15
PTCH1-210ENST00000468211 LCA5Q86VQ0 697 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 PLCZ1Q86YW0 608 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 OR7G2Q8NG99 324 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 OR4N2Q8NGD1 307 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 LINC01560Q8TB33 94 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 FOXC2Q99958 501 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 CXXC4Q9H2H0 198 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 FOLH1BQ9HBA9 442 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 SLC35C2Q9NQQ7 365 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 FOXD3Q9UJU5 478 aaPredicted RBP22.24■■□□□ 1.15
PTCH1-210ENST00000468211 PLEKHA6Q9Y2H5 1048 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 WIF1Q9Y5W5 379 aa22.24■■□□□ 1.15
PTCH1-210ENST00000468211 EEF1E1-BLOC1S5C9J1V9 151 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 EEF1E1O43324 174 aaKnown RBP22.23■■□□□ 1.15
PTCH1-210ENST00000468211 BCAS2O75934 225 aaPredicted RBP22.23■■□□□ 1.15
PTCH1-210ENST00000468211 TMIGD3P0DMS9 266 aaPredicted RBP22.23■■□□□ 1.15
PTCH1-210ENST00000468211 PKNOX1P55347 436 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 SLC29A2Q14542 456 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 DAZAP2Q15038 168 aaPredicted RBP22.23■■□□□ 1.15
PTCH1-210ENST00000468211 ADGRE4PQ86SQ3 457 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 SLC22A9Q8IVM8 553 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 RNF138Q8WVD3 245 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 NINJ1Q92982 152 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 TMCO6Q96DC7 493 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 ERP27Q96DN0 273 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 LRRC46Q96FV0 321 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 TXLNGYQ9BZA5 131 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 TAS2R10Q9NYW0 307 aa22.23■■□□□ 1.15
PTCH1-210ENST00000468211 H0Y3Z8 333 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 ENO1P06733 434 aaKnown RBP22.22■■□□□ 1.15
PTCH1-210ENST00000468211 ANXA4P09525 319 aaPredicted RBP22.22■■□□□ 1.15
PTCH1-210ENST00000468211 TCEA1P23193 301 aaKnown RBP22.22■■□□□ 1.15
PTCH1-210ENST00000468211 OPRM1P35372 400 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 DGKQP52824 942 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 GAS1P54826 345 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 ERCC6LQ2NKX8 1250 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 LARP4Q71RC2 724 aaKnown RBP eCLIP22.22■■□□□ 1.15
PTCH1-210ENST00000468211 EFHD2Q96C19 240 aaPredicted RBP22.22■■□□□ 1.15
PTCH1-210ENST00000468211 RMND5BQ96G75 393 aaPredicted RBP22.22■■□□□ 1.15
PTCH1-210ENST00000468211 TMUB1Q9BVT8 246 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 MID1IP1Q9NPA3 183 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 TBK1Q9UHD2 729 aa22.22■■□□□ 1.15
PTCH1-210ENST00000468211 A0A1W2PPM1 405 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 TUBAL3A6NHL2 446 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 CLCA1A8K7I4 914 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 G3V2L1 256 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 PLOD3O60568 738 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 ABCB7O75027 752 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 IL18BPO95998 194 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 SRD5A2P31213 254 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 LHX2P50458 406 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 HEPACAMQ14CZ8 416 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 IFNEQ86WN2 208 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 SLC44A2Q8IWA5 706 aaPredicted RBP22.21■■□□□ 1.15
PTCH1-210ENST00000468211 FAM9CQ8IZT9 166 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 CCNYL1Q8N7R7 359 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 ACMSDQ8TDX5 336 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 SIRT5Q9NXA8 310 aa22.21■■□□□ 1.15
PTCH1-210ENST00000468211 VPS13CQ709C8 3753 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 SERTM1A2A2V5 107 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 ZIC3O60481 467 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 DIAPH2O60879 1101 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms