RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 Q5PR19 223 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 GKAP1Q5VSY0 366 aaPredicted RBP12.41□□□□□ -0.42
RPP40-204ENST00000468105 UBE3DQ7Z6J8 389 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 C9orf40Q8IXQ3 194 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 DDIASQ8IXT1 998 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 ACTRT2Q8TDY3 377 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 ANKRD9Q96BM1 317 aaPredicted RBP12.41□□□□□ -0.42
RPP40-204ENST00000468105 Q96MF0 132 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 TIMP4Q99727 224 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 TMEM120AQ9BXJ8 343 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 ALOXE3Q9BYJ1 711 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 EXO5Q9H790 373 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 FARSBQ9NSD9 589 aaKnown RBP12.41□□□□□ -0.42
RPP40-204ENST00000468105 NMRK1Q9NWW6 199 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 DCTN4Q9UJW0 460 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 CCL27Q9Y4X3 112 aa12.41□□□□□ -0.42
RPP40-204ENST00000468105 CHCHD2Q9Y6H1 151 aaPredicted RBP12.41□□□□□ -0.42
RPP40-204ENST00000468105 A0A0G2JND7 137 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ERI3O43414 337 aaKnown RBP12.4□□□□□ -0.42
RPP40-204ENST00000468105 SEMA3DO95025 777 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 IFNA16P05015 189 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 LINC00032P0C843 101 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 PTX3P26022 381 aaPredicted RBP12.4□□□□□ -0.42
RPP40-204ENST00000468105 NEK2P51955 445 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ARFIP1P53367 373 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 PLA2G16P53816 162 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 IRX1P78414 480 aaPredicted RBP12.4□□□□□ -0.42
RPP40-204ENST00000468105 DUSP8Q13202 625 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 CUL3Q13618 768 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 IMPG1Q17R60 797 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 SLC9B1Q4ZJI4 515 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 FNDC7Q5VTL7 733 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 BICRALQ6AI39 1079 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 OGFOD2Q6N063 350 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 NIPAL1Q6NVV3 410 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ZNF793Q6ZN11 406 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 Q6ZSR9 355 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 LARP4Q71RC2 724 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPP40-204ENST00000468105 OR4N5Q8IXE1 308 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 MORN4Q8NDC4 146 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 OR10G3Q8NGC4 313 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 CEP70Q8NHQ1 597 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 PAQR8Q8TEZ7 354 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 THOC1Q96FV9 657 aaKnown RBP12.4□□□□□ -0.42
RPP40-204ENST00000468105 CMTM7Q96FZ5 175 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 SGCZQ96LD1 299 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 PPP3R2Q96LZ3 170 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 C3orf30Q96M34 536 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 MS4A8Q9BY19 250 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ACPTQ9BZG2 426 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ACKR4Q9NPB9 350 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 TCF7L2Q9NQB0 619 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 PRDM7Q9NQW5 492 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.42
RPP40-204ENST00000468105 CNOT11Q9UKZ1 510 aaKnown RBP12.4□□□□□ -0.42
RPP40-204ENST00000468105 DAPP1Q9UN19 280 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 ARL2BPQ9Y2Y0 163 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 WIF1Q9Y5W5 379 aa12.4□□□□□ -0.42
RPP40-204ENST00000468105 WASHC1A8K0Z3 465 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 C17orf105B2RV13 164 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 DVL2O14641 736 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 LSM1O15116 133 aaKnown RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 CTNSO60931 367 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 IGKV3-11P04433 115 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 P04436 131 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 PCSK2P16519 638 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 TIMP3P35625 211 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 RPS13P62277 151 aaKnown RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 GABPB1Q06547 395 aaPredicted RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 KRTAP1-1Q07627 177 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 DDX39BQ13838 428 aaKnown RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 ADPRMQ3LIE5 342 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 SGO1Q5FBB7 561 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 DEPDC1Q5TB30 811 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 SHEQ5VZ18 495 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 METTL21CQ5VZV1 264 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 FAM219BQ5XKK7 198 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 ABHD17CQ6PCB6 329 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 SCIMPQ6UWF3 145 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 TMEM64Q6YI46 380 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 ZNF595Q8IYB9 648 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 TMEM132CQ8N3T6 1108 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 FBXW8Q8N3Y1 598 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 C9orf106Q8NAJ2 232 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 OR2T11Q8NH01 316 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 PPWD1Q96BP3 646 aaKnown RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 TUBGCP3Q96CW5 907 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 MTERF1Q99551 399 aaKnown RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 EBF4Q9BQW3 602 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 PIGQQ9BRB3 760 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 NPLQ9BXD5 320 aaPredicted RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 RABEP2Q9H5N1 569 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 WDR55Q9H6Y2 383 aaPredicted RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 SIRT5Q9NXA8 310 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms