RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SLC25A35Q3KQZ1 300 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 NHSL2Q5HYW2 709 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 FAM71E1Q6IPT2 247 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 ANGPTL8Q6UXH0 198 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 C4orf33Q8N1A6 199 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 CDC26Q8NHZ8 85 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL7A1-207ENST00000467985 VSTM2LQ96N03 204 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 VIPAS39Q9H9C1 493 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 MKS1Q9NXB0 559 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 Q9UFV3 132 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 LGALS13Q9UHV8 139 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 CCDC168Q8NDH2 2452 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 HCFC1P51610 2035 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 INTS1Q8N201 2190 aaKnown RBP17.43■□□□□ 0.38
COL7A1-207ENST00000467985 PRAMEF25A6NGN4 478 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 HSPB2A8KAH6 182 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 MYO1GB0I1T2 1018 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 GNB5O14775 395 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 COQ9O75208 318 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 UGT2B11O75310 529 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 ERN1O75460 977 aaKnown RBP17.43■□□□□ 0.38
COL7A1-207ENST00000467985 REM1O75628 298 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 FREM3P0C091 2139 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 CAPN3P20807 821 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 PRPH2P23942 346 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 PTPN6P29350 595 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 KRT20P35900 424 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 MRPS22P82650 360 aaKnown RBP17.43■□□□□ 0.38
COL7A1-207ENST00000467985 CRYZQ08257 329 aaKnown RBP17.43■□□□□ 0.38
COL7A1-207ENST00000467985 EFR3AQ14156 821 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 HSPB2Q16082 182 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 VASNQ6EMK4 673 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 NOXRED1Q6NXP6 359 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 CLYBLQ8N0X4 340 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 TMBIM1Q969X1 311 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 SLC35A4Q96G79 324 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 NODALQ96S42 347 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 TIMP4Q99727 224 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 PRDM14Q9GZV8 571 aa17.43■□□□□ 0.38
COL7A1-207ENST00000467985 NPDC1Q9NQX5 325 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-207ENST00000467985 A0A087WV62 115 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 NPIPB8E9PQR5 432 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 SLC28A1O00337 649 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 SNPHO15079 494 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 RGS14O43566 566 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 TRIM13O60858 407 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 SEC22BO75396 215 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 CBR3O75828 277 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 EPPINO95925 133 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 CHEK2O96017 543 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 CT45A8P0DMV1 189 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 CT45A9P0DMV2 189 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 NTSP30990 170 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 ADH7P40394 386 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 NCBP2P52298 156 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL7A1-207ENST00000467985 CT45A2Q5DJT8 189 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 RNF165Q6ZSG1 346 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 C10orf107Q8IVU9 208 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 OR7G2Q8NG99 324 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 APOPT1Q96IL0 206 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 C12orf65Q9H3J6 166 aaKnown RBP17.42■□□□□ 0.38
COL7A1-207ENST00000467985 FOLH1BQ9HBA9 442 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 C1orf109Q9NX04 203 aa17.42■□□□□ 0.38
COL7A1-207ENST00000467985 EXO1Q9UQ84 846 aaKnown RBP17.42■□□□□ 0.38
COL7A1-207ENST00000467985 POLR3HQ9Y535 204 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-207ENST00000467985 ANKHD1Q8IWZ3 2542 aaKnown RBP17.42■□□□□ 0.38
COL7A1-207ENST00000467985 ARHGAP21Q5T5U3 1957 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 AZIN1O14977 448 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 ACTL6AO96019 429 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 NEFHP12036 1026 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 IL12BP29460 328 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 CORO7P57737 925 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 TLE4Q04727 773 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 PCLAFQ15004 111 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 ACSF3Q4G176 576 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-207ENST00000467985 CLEC6AQ6EIG7 209 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 LARP4Q71RC2 724 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL7A1-207ENST00000467985 LACC1Q8IV20 430 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 DMRTC2Q8IXT2 367 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-207ENST00000467985 FAM83FQ8NEG4 500 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-207ENST00000467985 ABTB1Q969K4 478 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-207ENST00000467985 ADOQ96SZ5 270 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 ANKRA2Q9H9E1 313 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 LRTM1Q9HBL6 345 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 MCCC2Q9HCC0 563 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 GALNT9Q9HCQ5 603 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 TNFRSF12AQ9NP84 129 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 OR10H1Q9Y4A9 318 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 CCL27Q9Y4X3 112 aa17.41■□□□□ 0.38
COL7A1-207ENST00000467985 PLOD2O00469 737 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 TSPAN2O60636 221 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 JUNP05412 331 aaKnown RBP17.4■□□□□ 0.38
COL7A1-207ENST00000467985 IFI6P09912 130 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 BMP7P18075 431 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 PTGDSP41222 190 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 PNLIPRP2P54317 469 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 ZNF155Q12901 538 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-207ENST00000467985 EIPR1Q53HC9 387 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 WIPI1Q5MNZ9 446 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms