RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 MARCOQ9UEW3 520 aaPredicted RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 GPR45Q9Y5Y3 372 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 USH1CQ9Y6N9 552 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 NCKAP5O14513 1909 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 UQCRHLA0A096LP55 91 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 WIPF3A6NGB9 483 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 LRRC3CA6NJW4 275 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 ADAM10O14672 748 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 ASNA1O43681 348 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 UGT2B11O75310 529 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 NME6O75414 186 aaPredicted RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 NKX2-2O95096 273 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 SNX4O95219 450 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 IGHG3P01860 377 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 KITP10721 976 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 GPC1P35052 558 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 PIGAP37287 484 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 PTGDSP41222 190 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 CASP3P42574 277 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 CLNS1AP54105 237 aaKnown RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 PNLIPRP2P54317 469 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 PHC1P78364 1004 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 SRSF11Q05519 484 aaKnown RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 PLCXD2Q0VAA5 305 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 NNATQ16517 81 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 GSTA3Q16772 222 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 LSM12Q3MHD2 195 aaKnown RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 FNDC7Q5VTL7 733 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 MFSD12Q6NUT3 480 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 FAM47EQ6ZV65 393 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 FGD2Q7Z6J4 655 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 PRR22Q8IZ63 422 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 FAM13CQ8NE31 585 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 NUP43Q8NFH3 380 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 FAM110BQ8TC76 370 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 SFXN5Q8TD22 340 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 TMBIM1Q969X1 311 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 FAM120BQ96EK7 910 aaKnown RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 TMEM41AQ96HV5 264 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 COL21A1Q96P44 957 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 MS4A4EQ96PG1 132 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 DPY30Q9C005 99 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 CXorf36Q9H7Y0 433 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 C3orf14Q9HBI5 128 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZFP64Q9NPA5 681 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 GIN1Q9NXP7 522 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 QPCTLQ9NXS2 382 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 TUBA8Q9NY65 449 aaPredicted RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 SEC14L3Q9UDX4 400 aa8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 USP9XQ93008 2570 aaPredicted RBP8.69□□□□□ -1.02
SDCCAG3-208ENST00000466579 DNAJC13O75165 2243 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZNF407Q9C0G0 2248 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GOLGA8QA0A0J9YX86 632 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 A0A1B0GVC2 190 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 PRSS51A0A1B0GVH4 220 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GOLGA8OA6NCC3 632 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 E9PBE3 544 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 NPIPA5E9PKD4 350 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GOLGA8NF8WBI6 632 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 TFECO14948 347 aaPredicted RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 SOX30O94993 753 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 UNC5CO95185 931 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 IL33O95760 270 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 C6orf47O95873 294 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 IDO1P14902 403 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 EFNA1P20827 205 aaPredicted RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 IL12AP29459 219 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 RFC3P40938 356 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 KIR3DL1P43629 444 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZFP36L2P47974 494 aaKnown RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 DNASE1L1P49184 302 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GAS1P54826 345 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 UFM1P61960 85 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 PPIAP62937 165 aaKnown RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 HBA1P69905 142 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 MRPS22P82650 360 aaKnown RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 PRR5P85299 388 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZNF155Q12901 538 aaPredicted RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GAB1Q13480 694 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 EFR3AQ14156 821 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 ELOAQ14241 798 aaKnown RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 EIF2S3LQ2VIR3 472 aaKnown RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 PDCD4Q53EL6 469 aaKnown RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 ANXA8L1Q5VT79 327 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 OR4F3Q6IEY1 312 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 SLC30A6Q6NXT4 461 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GFRALQ6UXV0 394 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 SLC22A16Q86VW1 577 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 SLC44A2Q8IWA5 706 aaPredicted RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GHDCQ8N2G8 530 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 FAM109AQ8N4B1 249 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 FAM26EQ8N5C1 309 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 TMEM251Q8N6I4 163 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 CDRT4Q8N9R6 151 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GLB1L3Q8NCI6 653 aaPredicted RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 OR4N2Q8NGD1 307 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 OR52N2Q8NGI0 321 aa8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 GOT1L1Q8NHS2 421 aaPredicted RBP8.68□□□□□ -1.02
SDCCAG3-208ENST00000466579 DYDC1Q8WWB3 177 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms