RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GCNT2Q8N0V5 402 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 FGFRL1Q8N441 504 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF491Q8N8L2 437 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 SYAP1Q96A49 352 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 VSTM2LQ96N03 204 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 THUMPD2Q9BTF0 503 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 CARD6Q9BX69 1037 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 MRPL13Q9BYD1 178 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 ESM1Q9NQ30 184 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF346Q9UL40 294 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 KLF2Q9Y5W3 355 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 AP1M2Q9Y6Q5 423 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 PARD3Q8TEW0 1356 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 CCDC7Q96M83 1385 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 IGHV3OR16-12A0A075B7B8 117 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 A0A0U1RQV5 110 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 A0A1B0GTH9 108 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 A0A1B0GUL7 405 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 C11orf98E9PRG8 122 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 H0YL77 283 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ANGPT2O15123 496 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 OR4F21O95013 312 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 IFNB1P01574 187 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 CA3P07451 260 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 HOXD4P09016 255 aaPredicted RBP3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 CALCBP10092 127 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 TSPAN8P19075 237 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 RFC2P35250 354 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ELK3P41970 407 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 STK19P49842 368 aaPredicted RBP3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 EMDP50402 254 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ARHGDIAP52565 204 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 CNPY1Q3B7I2 92 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 TMEM41BQ5BJD5 291 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ACER2Q5QJU3 275 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 FAM219BQ5XKK7 198 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 NIPAL3Q6P499 406 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 CENPUQ71F23 418 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 CEACAM19Q7Z692 300 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF573Q86YE8 665 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 TOMM40LQ969M1 308 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 C9orf85Q96MD7 179 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 SOSTQ9BQB4 213 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 TBCDQ9BTW9 1192 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ADNPQ9H2P0 1102 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 RIBC2Q9H4K1 309 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 DCAF13Q9NV06 445 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF446Q9NWS9 450 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 DUS2Q9NX74 493 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 BLOC1S6Q9UL45 172 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 RNF24Q9Y225 148 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 MFHAS1Q9Y4C4 1052 aa3.48□□□□□ -1.85
CDC42BPA-211ENST00000466538 ACOD1A6NK06 481 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 MAPK13O15264 365 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 RAMP1O60894 148 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 SH3BGRLO75368 114 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 RENP00797 406 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 KRT8P05787 483 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 MELTFP08582 738 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 NCF1P14598 390 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 PAICSP22234 425 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 CALRP27797 417 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 SHC1P29353 583 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 PTGFRP43088 359 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 HTR5AP47898 357 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 KLHL30Q0D2K2 578 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 EXOSC2Q13868 293 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 RFTN1Q14699 578 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 C14orf28Q4W4Y0 310 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 DCST2Q5T1A1 773 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 SLC39A4Q6P5W5 647 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 BTNL3Q6UXE8 466 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 TMEM184AQ6ZMB5 413 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 Q7L0L9 218 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 LHFPL4Q7Z7J7 247 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 SLC47A2Q86VL8 602 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 ERICH1Q86X53 443 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 CENPLQ8N0S6 344 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 OR4F17Q8NGA8 305 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 FNDC8Q8TC99 324 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 CRYGNQ8WXF5 182 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 ART4Q93070 314 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 ELMO2Q96JJ3 720 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 OR4F4Q96R69 305 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 FEM1AQ9BSK4 669 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 UBXN6Q9BZV1 441 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 PNNQ9H307 717 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 WDR76Q9H967 626 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 PAK5Q9P286 719 aa3.47□□□□□ -1.85
CDC42BPA-211ENST00000466538 SHISA9B4DS77 424 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 H3BMH7 237 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 TM9SF1O15321 606 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 PI15O43692 258 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 SDC3O75056 442 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 IGHV3-9P01782 118 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 H2AFZP0C0S5 128 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 GSTT2P0CG29 244 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 GSTT2BP0CG30 244 aa3.46□□□□□ -1.86
CDC42BPA-211ENST00000466538 PVRP15151 417 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms