RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MYO1GB0I1T2 1018 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 MAGEB3O15480 346 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 FOXD2O60548 495 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 HNRNPCP07910 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 SOAT1P35610 550 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 AVPR1BP47901 424 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 DAPP51397 102 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 XKP51811 444 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 CSNK2BP67870 215 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 BTG2P78543 158 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 ZNF846Q147U1 533 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 ANKDD1AQ495B1 522 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 PIP4P1Q86T03 277 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 SIMC1Q8NDZ2 872 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 DEFB124Q8NES8 71 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 OR9A2Q8NGT5 310 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 GOT1L1Q8NHS2 421 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 ZNF764Q96H86 408 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 SLC35A5Q9BS91 424 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 DGCR6LQ9BY27 220 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 WDR12Q9GZL7 423 aaKnown RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 TPT1P8Q9HAU6 139 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 NECTIN3Q9NQS3 549 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 PAK1IP1Q9NWT1 392 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 ABCG2Q9UNQ0 655 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 GMPPBQ9Y5P6 360 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 SCN3AQ9NY46 2000 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 SPTBP11277 2137 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 TGFBR3LH3BV60 316 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 XCR1P46094 333 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 SLC35A2P78381 396 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 PPP1R8Q12972 351 aaKnown RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 TRIP6Q15654 476 aaKnown RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 COX20Q5RI15 118 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 DHRS13Q6UX07 377 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 DCDC5Q6ZRR9 648 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 TSPYL5Q86VY4 417 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 PTOV1Q86YD1 416 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 SLC15A4Q8N697 577 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 BMPERQ8N8U9 685 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 OR4K14Q8NGD5 310 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 ZFP90Q8TF47 636 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 IPCEF1Q8WWN9 437 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 S100ZQ8WXG8 99 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 OR5P2Q8WZ92 322 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 ANKRD9Q96BM1 317 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 ZBED6CLQ96FA7 236 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 PITX2Q99697 317 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 DPH2Q9BQC3 489 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 CCDC90BQ9GZT6 254 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 RIBC2Q9H4K1 309 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 REEP1Q9H902 201 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 RARRES3Q9UL19 164 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 NDRG4Q9ULP0 352 aaKnown RBP17.41■□□□□ 0.38
CAPN3-209ENST00000466222 VPS4AQ9UN37 437 aa17.41■□□□□ 0.38
CAPN3-209ENST00000466222 PTGES3LE9PB15 166 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 H0YIG0 161 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 RFPL3O75679 317 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 SCRG1O75711 98 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 ACVR2AP27037 513 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 MAPK10P53779 464 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 EMX1Q04741 257 aaPredicted RBP17.4■□□□□ 0.38
CAPN3-209ENST00000466222 CTF1Q16619 201 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 CLPPQ16740 277 aaPredicted RBP17.4■□□□□ 0.38
CAPN3-209ENST00000466222 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.4■□□□□ 0.38
CAPN3-209ENST00000466222 ANGPTL8Q6UXH0 198 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 SLCO6A1Q86UG4 719 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 AGBL5Q8NDL9 886 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 VMP1Q96GC9 406 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 CDC6Q99741 560 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 AKIRIN1Q9H9L7 192 aaPredicted RBP17.4■□□□□ 0.38
CAPN3-209ENST00000466222 HMG20AQ9NP66 347 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 SLC22A11Q9NSA0 550 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 ENTPD4Q9Y227 616 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 ERGIC3Q9Y282 383 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 ZNF780BQ9Y6R6 833 aa17.4■□□□□ 0.38
CAPN3-209ENST00000466222 MITFO75030 526 aaPredicted RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 NUDT7P0C024 238 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 RNH1P13489 461 aaKnown RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 ZNF28P17035 718 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 MAOAP21397 527 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 NTSP30990 170 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SOX18P35713 384 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 CLK3P49761 638 aaKnown RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 EFNA3P52797 238 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 MVDP53602 400 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 RPS26P62854 115 aaKnown RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 AQP6Q13520 282 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SPCS2Q15005 226 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 RGS21Q2M5E4 152 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 VWA2Q5GFL6 755 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SYT6Q5T7P8 510 aaPredicted RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 TMEM107Q6UX40 140 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 PPP1R3BQ86XI6 285 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 CNIH3Q8TBE1 160 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 KAT2AQ92830 837 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 HSH2DQ96JZ2 352 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 FAM210AQ96ND0 272 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 EPYCQ99645 322 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SLC7A5P2Q9GIP4 190 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms