RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 LDLRAP1Q5SW96 308 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 DCAF12Q5T6F0 453 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 C1QL3Q5VWW1 255 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 ANKRD22Q5VYY1 191 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 CDC73Q6P1J9 531 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 BLOC1S3Q6QNY0 202 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 SLC22A25Q6T423 547 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 CYP20A1Q6UW02 462 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 PET117Q6UWS5 81 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 SNX20Q7Z614 316 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 THAP5Q7Z6K1 395 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 PPP1R3BQ86XI6 285 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 TUSC5Q8IXB3 177 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 PIANPQ8IYJ0 282 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 NLGN4XQ8N0W4 816 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 BMPERQ8N8U9 685 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 RASGEF1AQ8N9B8 481 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 NLGN4YQ8NFZ3 816 aaPredicted RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 PSMA8Q8TAA3 256 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 BBS10Q8TAM1 723 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 LKAAEAR1Q8TD35 194 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 KIAA1143Q96AT1 154 aaPredicted RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 TESCQ96BS2 214 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 KLHL29Q96CT2 875 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 MRPL48Q96GC5 212 aaKnown RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 TCTN2Q96GX1 697 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 ZNF764Q96H86 408 aaPredicted RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 PLEKHA8Q96JA3 519 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 ZNF514Q96K75 400 aaPredicted RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 CAPZA3Q96KX2 299 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 ZNF778Q96MU6 729 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 ZNF416Q9BWM5 594 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 TEX12Q9BXU0 123 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 SPRY4Q9C004 299 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 UGT1A7Q9HAW7 530 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 UGT1A10Q9HAW8 530 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 UGT1A8Q9HAW9 530 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 APMAPQ9HDC9 416 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 GSN-AS1Q9NRJ2 163 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 TREX1Q9NSU2 369 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 FBXO34Q9NWN3 711 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 SMPD3Q9NY59 655 aaPredicted RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 DNAJB9Q9UBS3 223 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 RNF24Q9Y225 148 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 KCNK6Q9Y257 313 aa6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 RP1L1Q8IWN7 2480 aaPredicted RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 TNRC6AQ8NDV7 1962 aaKnown RBP6.88□□□□□ -1.31
RPUSD3-212ENST00000466141 CRYBG3Q68DQ2 2970 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 SHANK1Q9Y566 2161 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 FAM187AA6NFU0 413 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 WIPF3A6NGB9 483 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 OR51F1A6NGY5 319 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 A8MU76 341 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 LOC110117498-PIK3R3F6TDL0 507 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 MKRN2OSH3BPM6 223 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 TSPAN4O14817 238 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 SLC16A6O15403 523 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 CAPN5O15484 640 aaPredicted RBP6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 DIRAS3O95661 229 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 LCKP06239 509 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 CDK1P06493 297 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 CRYGCP07315 174 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 CD3GP09693 182 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 PRSS56P0CW18 603 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 SMIM6P0DI80 62 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 F3P13726 295 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 PRF1P14222 555 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 ADRA1DP25100 572 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 ARNTP27540 789 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 GRNP28799 593 aaKnown RBP6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 OMPP47874 163 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 FASLGP48023 281 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 PRLHRP49683 370 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 AGFG1P52594 562 aaKnown RBP6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 PRPS1P60891 318 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 CRADDP78560 199 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 GALK2Q01415 458 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 FOLH1Q04609 750 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 TMEM115Q12893 351 aaPredicted RBP6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 LCP2Q13094 533 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 PTK6Q13882 451 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 KYNUQ16719 465 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 GPR33Q49SQ1 333 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 NADK2Q4G0N4 442 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 ZNF658BQ4V348 819 aaPredicted RBP6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 BCL7AQ4VC05 210 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 TSTD2Q5T7W7 516 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 LCN1P1Q5VSP4 162 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 TCTN3Q6NUS6 607 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 AFTPHQ6ULP2 937 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 ZNF761Q86XN6 746 aaPredicted RBP6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 TRAPPC5Q8IUR0 188 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 CMIPQ8IY22 773 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 ZNF679Q8IYX0 411 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 PLD6Q8N2A8 252 aaKnown RBP6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 SFRP1Q8N474 314 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 MMGT1Q8N4V1 131 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 LRRC17Q8N6Y2 441 aa6.87□□□□□ -1.31
RPUSD3-212ENST00000466141 MCUQ8NE86 351 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms