RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 CEACAM20Q6UY09 585 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 OVCH1Q7RTY7 1134 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 TSEN54Q7Z6J9 526 aaKnown RBP8.21□□□□□ -1.1
UBA3-208ENST00000465627 SPATA24Q86W54 205 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 EID3Q8N140 333 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 METTL25Q8N6Q8 603 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 ZNF615Q8N8J6 731 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 C11orf65Q8NCR3 313 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 HIPK4Q8NE63 616 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 NUP43Q8NFH3 380 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 PTPMT1Q8WUK0 201 aaPredicted RBP8.21□□□□□ -1.1
UBA3-208ENST00000465627 APOBEC4Q8WW27 367 aaKnown RBP8.21□□□□□ -1.1
UBA3-208ENST00000465627 NRG4Q8WWG1 115 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 PPWD1Q96BP3 646 aaKnown RBP8.21□□□□□ -1.1
UBA3-208ENST00000465627 NSMCE2Q96MF7 247 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 MS4A4EQ96PG1 132 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 ALOXE3Q9BYJ1 711 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 VN1R1Q9GZP7 353 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 OR51I1Q9H343 314 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 SYNDIG1Q9H7V2 258 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 AKIRIN1Q9H9L7 192 aaPredicted RBP8.21□□□□□ -1.1
UBA3-208ENST00000465627 C3orf14Q9HBI5 128 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 BCL2L10Q9HD36 194 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 IRAK4Q9NWZ3 460 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 TRPC4Q9UBN4 977 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 CLCA2Q9UQC9 943 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.1
UBA3-208ENST00000465627 ZNF451Q9Y4E5 1061 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 KCNE3Q9Y6H6 103 aa8.21□□□□□ -1.1
UBA3-208ENST00000465627 FAM149AA5PLN7 773 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 H0Y3Z8 333 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 MEN1O00255 615 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 CLDN4O14493 209 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 POLR1CO15160 346 aaPredicted RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 CPNE3O75131 537 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 NME6O75414 186 aaPredicted RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 CDC123O75794 336 aaPredicted RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 PRSS23O95084 383 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 ALBP02768 609 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 ACP2P11117 423 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 MATN1P21941 496 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 ELAVL4P26378 380 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 GPC1P35052 558 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SOX11P35716 441 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 EMDP50402 254 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 AP2B1P63010 937 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 DCDP81605 110 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 CDK6Q00534 326 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SLC34A1Q06495 639 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SLC13A2Q13183 592 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 TP53BP2Q13625 1128 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SCARB2Q14108 478 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SERTAD2Q14140 314 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 ELOAQ14241 798 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 LASP1Q14847 261 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 TRIP6Q15654 476 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.1
UBA3-208ENST00000465627 ARHGAP40Q5TG30 622 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 PRAMEF8Q5VWM4 474 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 PRAMEF7Q5VXH5 474 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 HMBOX1Q6NT76 420 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 TNFAIP8L2Q6P589 184 aaPredicted RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 ZCCHC12Q6PEW1 402 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 BHLHB9Q6PI77 547 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 FAM198BQ6UWH4 519 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 ENPP6Q6UWR7 440 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 CBLL1Q75N03 491 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 EIF3MQ7L2H7 374 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 GALNT10Q86SR1 603 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 TMEM126BQ8IUX1 230 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SLC30A8Q8IWU4 369 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 PQLC1Q8N2U9 271 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 VWA5B2Q8N398 1253 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SLC16A11Q8NCK7 471 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 CHDHQ8NE62 594 aaPredicted RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 OR5D16Q8NGK9 328 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 NFKBIDQ8NI38 313 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 STT3BQ8TCJ2 826 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 FIG4Q92562 907 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 RAB8BQ92930 207 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 TSLPQ969D9 159 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 FKBP10Q96AY3 582 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 TAMM41Q96BW9 452 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SLC35A4Q96G79 324 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 SLC35G5Q96KT7 338 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 VSTM2LQ96N03 204 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 OR7D2Q96RA2 312 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 CTRCQ99895 268 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 ACTRT3Q9BYD9 372 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 TRIM15Q9C019 465 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 DDX18Q9NVP1 670 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 THUMPD1Q9NXG2 353 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 GIN1Q9NXP7 522 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 NDOR1Q9UHB4 597 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 FAF1Q9UNN5 650 aaPredicted RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 PPIEQ9UNP9 301 aaKnown RBP8.2□□□□□ -1.1
UBA3-208ENST00000465627 AP4S1Q9Y587 144 aa8.2□□□□□ -1.1
UBA3-208ENST00000465627 PCDHGA3Q9Y5H0 932 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms