RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GID8Q9NWU2 228 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 NTMQ9P121 344 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF639Q9UID6 485 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 FAF1Q9UNN5 650 aaPredicted RBP16.14■□□□□ 0.17
CPSF4-209ENST00000465132 CORO2BQ9UQ03 480 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 LRBAP50851 2863 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 CSMD1Q96PZ7 3565 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 TRBV11-1A0A0K0K1C0 115 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 C2orf92A0A1B0GVN3 265 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 AGR2O95994 175 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 ABCB1P08183 1280 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-209ENST00000465132 SOAT1P35610 550 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 CHI3L1P36222 383 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-209ENST00000465132 MC3RP41968 323 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 GPR143P51810 404 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 NRG3P56975 720 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 SLC37A1P57057 533 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 ART3Q13508 389 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 MPEG1Q2M385 716 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 FAM180BQ6P0A1 224 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 SZRD1Q7Z422 152 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 FUNDC1Q8IVP5 155 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 DND1Q8IYX4 353 aaKnown RBP16.13■□□□□ 0.17
CPSF4-209ENST00000465132 TAGAPQ8N103 731 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 SLC15A4Q8N697 577 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 AMER2Q8N7J2 671 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 APCDD1LQ8NCL9 501 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 ITLN2Q8WWU7 325 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-209ENST00000465132 KAT2AQ92830 837 aa16.13■□□□□ 0.17
CPSF4-209ENST00000465132 MRTO4Q9UKD2 239 aaKnown RBP16.13■□□□□ 0.17
CPSF4-209ENST00000465132 A0A096LPI6 279 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 DUXAA6NLW8 204 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 CAPN14A8MX76 684 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 SCN2BO60939 215 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 UNC5CO95185 931 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 RASAL1O95294 804 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 CRYABP02511 175 aaKnown RBP16.12■□□□□ 0.17
CPSF4-209ENST00000465132 MST1P26927 711 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 WNT3P56703 355 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 HBA1P69905 142 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 RNF4P78317 190 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 MRPS35P82673 323 aaKnown RBP16.12■□□□□ 0.17
CPSF4-209ENST00000465132 MGAT2Q10469 447 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 LTB4RQ15722 352 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 MEP1AQ16819 746 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 TRMT12Q53H54 448 aaKnown RBP16.12■□□□□ 0.17
CPSF4-209ENST00000465132 ABHD17BQ5VST6 288 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 FAM91A1Q658Y4 838 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 FAM111BQ6SJ93 734 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF621Q6ZSS3 439 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 CDRT4Q8N9R6 151 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 NUP43Q8NFH3 380 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 OR7G2Q8NG99 324 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 OR52R1Q8NGF1 315 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 SLC22A8Q8TCC7 542 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 VPS33AQ96AX1 596 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 SH3GL1Q99961 368 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 CCDC106Q9BWC9 280 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 MYLK2Q9H1R3 596 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 THUMPD1Q9NXG2 353 aaKnown RBP16.12■□□□□ 0.17
CPSF4-209ENST00000465132 STMN3Q9NZ72 180 aa16.12■□□□□ 0.17
CPSF4-209ENST00000465132 KLF2Q9Y5W3 355 aaPredicted RBP16.12■□□□□ 0.17
CPSF4-209ENST00000465132 TRGV8A0A0C4DH27 118 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 A0A1W2PS29 197 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 OR5H15A6NDH6 313 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 UPK1AO00322 258 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 ACOX3O15254 700 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 ELAVL4P26378 380 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 GRNP28799 593 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 SSTR4P31391 388 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 TMED10P49755 219 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 PSMD4P55036 377 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 DUSP2Q05923 314 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 PRSS53Q2L4Q9 553 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 H3F3CQ6NXT2 135 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 DGAT2L6Q6ZPD8 337 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 ANKRD46Q86W74 232 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 RPS19BP1Q86WX3 136 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 MCEMP1Q8IX19 187 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 DPP10Q8N608 796 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF615Q8N8J6 731 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 GTF2H4Q92759 462 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 FAM120BQ96EK7 910 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 HSPBAP1Q96EW2 488 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 CCDC120Q96HB5 630 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 MAGED4Q96JG8 741 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 PHF12Q96QT6 1004 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 RUBCNLQ9H714 662 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 EFCAB1Q9HAE3 211 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 GIN1Q9NXP7 522 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 NDE1Q9NXR1 346 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 ARMCX1Q9P291 453 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 SUCOQ9UBS9 1254 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 SEC14L3Q9UDX4 400 aa16.11■□□□□ 0.17
CPSF4-209ENST00000465132 YARS2Q9Y2Z4 477 aaKnown RBP16.11■□□□□ 0.17
CPSF4-209ENST00000465132 RNF103-CHMP3A0A140T963 221 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 A8MUI8 341 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 EVPLLA8MZ36 301 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 C9JVG2 144 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 CBX7O95931 251 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms